@ARTICLE{TreeBASE2Ref28930,
author = {P?vel Matos-Marav? and Niklas Wahlberg and Alexandre Antonelli and Carla M. Penz},
title = {Species limits in butterflies (Lepidoptera: Nymphalidae): reconciling classical taxonomy with the multispecies coalescent},
year = {2019},
keywords = {Bayes factor; clearwing Satyrinae; Haeterini; Neotropics; speciation; systematics},
doi = {10.1111/syen.12352},
url = {http://onlinelibrary.wiley.com/doi/full/10.1111/syen.12352},
pmid = {},
journal = {Systematic Entomology},
volume = {},
number = {},
pages = {},
abstract = {Species delimitation is at the core of biological sciences. During the last decade, molecular‐based approaches have advanced the field by providing additional sources of evidence to classical, morphology‐based taxonomy. However, taxonomy has not yet fully embraced molecular species delimitation beyond threshold‐based, single‐gene approaches, and taxonomic knowledge is not commonly integrated into multilocus species delimitation models. Here we aim to bridge empirical data (taxonomic and genetic) with recently developed coalescent‐based species delimitation approaches. We use the multispecies coalescent model as implemented in two Bayesian methods (dissect/stacey and bp&p) to infer species hypotheses. In both cases, we account for phylogenetic uncertainty (by not using any guide tree) and taxonomic uncertainty (by measuring the impact of using a priori taxonomic assignments to specimens). We focus on an entire Neotropical tribe of butterflies, the Haeterini (Nymphalidae: Satyrinae). We contrast divergent taxonomic opinion ? splitting, lumping and misclassifying species ? in the light of different phenotypic classifications proposed to date. Our results provide a solid background for the recognition of 22 species. The synergistic approach presented here overcomes limitations in both traditional taxonomy (e.g. by recognizing cryptic species) and molecular‐based methods (e.g. by recognizing structured populations, and not raising them to species). Our framework provides a step forward towards standardization and increasing reproducibility of species delimitations.}
}
Taxa for Study 23439
Citation title:
"Species limits in butterflies (Lepidoptera: Nymphalidae): reconciling classical taxonomy with the multispecies coalescent".
Study name:
"Species limits in butterflies (Lepidoptera: Nymphalidae): reconciling classical taxonomy with the multispecies coalescent".
This study is part of submission 23439
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
3367592 |
Aeropetes tulbaghia CP13_01 |
366011
|
5588052
|
3367602 |
Bicyclus anynana EW10 5 |
110368
|
5434863
|
3367549 |
Bicyclus anynana EW10_5 |
110368
|
5434863
|
3367541 |
Brassolis sophorae NW122_21 |
513115
|
2978728
|
3367603 |
Calisto smintheus PM07 05 |
|
7633778
|
3367538 |
Calisto smintheus PM07_05 |
|
7633778
|
3367608 |
Cithaerias andromeda PM14 21 |
|
|
3367576 |
Cithaerias andromeda PM14_21 |
|
|
3367618 |
Cithaerias aurora CP01 52 |
270028
|
3386686
|
3367589 |
Cithaerias aurora CP01_52 |
270028
|
3386686
|
3367546 |
Cithaerias aurora NW92_1 |
270028
|
3386686
|
3367537 |
Cithaerias aurora NW93_1 |
270028
|
3386686
|
3367601 |
Cithaerias cliftoni LEP 08919 |
|
|
3367620 |
Cithaerias cliftoni LEP 10406 |
|
|
3367551 |
Cithaerias cliftoni LEP_08919 |
|
|
3367560 |
Cithaerias cliftoni LEP_10406 |
|
|
3367529 |
Cithaerias cliftoni PM14_17 |
|
|
3363826 |
Cithaerias pireta BCI86376 |
366043
|
7634062
|
3367621 |
Cithaerias pireta LEP 09925 |
|
|
3367614 |
Cithaerias pireta LEP 09926 |
|
|
3367557 |
Cithaerias pireta LEP_09925 |
366043
|
7634062
|
3367531 |
Cithaerias pireta LEP_09926 |
366043
|
7634062
|
3367556 |
Cithaerias pireta PM24_06 |
366043
|
7634062
|
3367582 |
Cithaerias pyropina LEP_14256 |
|
|
3367547 |
Cithaerias pyropina LEP_14257 |
|
|
3364066 |
Cithaerias pyropina PM0095 |
|
|
3367578 |
Dulcedo polita LEP_14258 |
|
|
3367550 |
Dulcedo polita PM11_05 |
|
|
3367604 |
Elymnias casiphone NW121 20 |
366055
|
2961281
|
3367585 |
Elymnias casiphone NW121_20 |
366055
|
2961281
|
3367622 |
Erebia oeme EW24 7 |
242259
|
2973611
|
3367528 |
Erebia oeme EW24_7 |
242259
|
2973611
|
3363975 |
Haetera macleannania FLMNH284117 |
|
|
3367611 |
Haetera piera CP01 84 |
127283
|
2975206
|
3367548 |
Haetera piera CP01_84 |
127283
|
2975206
|
3367606 |
Haetera piera LEP 04409 |
|
|
3367631 |
Haetera piera LEP 08916 |
|
|
3367533 |
Haetera piera LEP_04409 |
127283
|
2975206
|
3367574 |
Haetera piera LEP_08916 |
127283
|
2975206
|
3364054 |
Haetera piera PM0091 |
127283
|
2975206
|
3367623 |
Lethe minerva NW121 17 |
366103
|
2971902
|
3367591 |
Lethe minerva NW121_17 |
366103
|
2971902
|
3367579 |
Manerebia cyclopina CP03_63 |
366106
|
2963135
|
3367634 |
Melanitis leda NW66 6 |
127353
|
2969699
|
3367572 |
Melanitis leda NW66_6 |
127353
|
2969699
|
3367599 |
Morpho helenor NW66 5 |
64456
|
5956035
|
3367571 |
Morpho helenor NW66_5 |
64456
|
5956035
|
3367612 |
Oressinoma sorata CP06 89 |
127289
|
3386862
|
3367554 |
Oressinoma sorata CP06_89 |
127289
|
3386862
|
3367532 |
Orsotriaena medus EW25_17 |
366129
|
2971386
|
3367626 |
Pararge aegeria EW1 1 |
116150
|
2957239
|
3367568 |
Pararge aegeria EW1_1 |
116150
|
2957239
|
3367559 |
Pierella brasiliensis LEP_08908 |
|
|
3367552 |
Pierella brasiliensis LEP_08911 |
|
|
3367544 |
Pierella brasiliensis LEP_08912 |
|
|
3367587 |
Pierella brasiliensis NW93_2 |
|
|
3367609 |
Pierella chalybaea LEP 08934 |
|
|
3367536 |
Pierella chalybaea LEP_04597 |
|
|
3367553 |
Pierella chalybaea LEP_08934 |
|
|
3367607 |
Pierella chalybaea PM14 11 |
|
|
3367632 |
Pierella chalybaea PM14 20 |
|
|
3367567 |
Pierella chalybaea PM14_11 |
|
|
3367581 |
Pierella chalybaea PM14_20 |
|
|
3363999 |
Pierella helvina BCI80049 |
|
|
3363956 |
Pierella helvina FLMNH146191 |
|
|
3364057 |
Pierella helvina LEP55828 |
|
|
3367564 |
Pierella helvina PM24_01 |
|
|
3367563 |
Pierella helvina PM24_02 |
|
|
3367535 |
Pierella helvina PM24_03 |
|
|
3367624 |
Pierella hortona CP01 69 |
|
|
3367590 |
Pierella hortona CP01_69 |
|
|
3367605 |
Pierella hortona CP05 34 |
|
|
3367526 |
Pierella hortona CP05_34 |
|
|
3367613 |
Pierella hortona LEP 08928 |
|
|
3367569 |
Pierella hortona LEP_08928 |
|
|
3367625 |
Pierella hyceta CP02 85 |
|
|
3367565 |
Pierella hyceta CP02_85 |
|
|
3367636 |
Pierella hyceta CP03 60 |
|
|
3367561 |
Pierella hyceta CP03_60 |
|
|
3367615 |
Pierella hyceta CP04 47 |
|
|
3367588 |
Pierella hyceta CP04_47 |
|
|
3367610 |
Pierella hyceta LEP 08925 |
|
|
3367542 |
Pierella hyceta LEP_08925 |
|
|
3367562 |
Pierella hyceta LEP_08926 |
|
|
3364020 |
Pierella hyceta PM0089 |
|
|
3363984 |
Pierella hyceta PM0090 |
|
|
3364047 |
Pierella hyceta SnPe05 |
|
|
3367539 |
Pierella keithbrowni NW108_2 |
|
|
3367630 |
Pierella lena LEP 08908 |
|
|
3367628 |
Pierella lena LEP 08911 |
|
|
3367597 |
Pierella lena LEP 08912 |
|
|
3367594 |
Pierella lena LEP_08908 |
|
|
3367595 |
Pierella lena LEP_08911 |
|
|
3367593 |
Pierella lena LEP_08912 |
|
|
3367596 |
Pierella lena NW93_2 |
|
|
3367629 |
Pierella lena PM14 19 |
|
|
3367573 |
Pierella lena PM14_13 |
|
|
3367583 |
Pierella lena PM14_19 |
|
|
3367530 |
Pierella lucia CP05_11 |
|
|
3367635 |
Pierella lucia LEP 04613 |
|
|
3367617 |
Pierella lucia LEP 08935 |
|
|
3367584 |
Pierella lucia LEP_04613 |
|
|
3367555 |
Pierella lucia LEP_08935 |
|
|
3367545 |
Pierella lucia PM14_12 |
|
|
3363909 |
Pierella luna BCI90713 |
|
|
3367633 |
Pierella luna LEP 09797 |
|
|
3367598 |
Pierella luna LEP 09921 |
|
|
3367527 |
Pierella luna LEP_09797 |
|
|
3367558 |
Pierella luna LEP_09921 |
|
|
3367540 |
Pierella luna PM24_04 |
|
|
3367627 |
Pierella nereis CP14 08 |
|
|
3367566 |
Pierella nereis CP14_08 |
|
|
3367580 |
Pseudohaetera hypaesia CP03_99 |
366170
|
3386904
|
3367586 |
Pseudohaetera hypaesia CP04_57 |
366170
|
3386904
|
3367600 |
Pseudohaetera hypaesia LEP 08924 |
|
|
3367534 |
Pseudohaetera hypaesia LEP_08924 |
366170
|
3386904
|
3367570 |
Pseudohaetera hypaesia LEP_09562 |
366170
|
3386904
|
3364076 |
Pseudohaetera hypaesia PM0062 |
366170
|
3386904
|
3367616 |
Satyrus actaea NW162 21 |
111940
|
2957061
|
3367575 |
Satyrus actaea NW162_21 |
111940
|
2957061
|
3367619 |
Taygetis virgilia NW108 3 |
270093
|
2981719
|
3367543 |
Taygetis virgilia NW108_3 |
270093
|
2981719
|
3367577 |
Zeuxidia dorhni NW101_2 |
366202
|
10299000
|