@ARTICLE{TreeBASE2Ref29564,
author = {Martyn Kennedy and Sampath S Seneviratne and Nicolas J Rawlence and Shakila Ratnayake and Hamish G. Spencer},
title = {The phylogenetic placement of the enigmatic Indian Cormorant, Phalacrocorax fuscicollis (Phalacrocoracidae)},
year = {2019},
keywords = {Indian Cormorant, Phalacrocorax fuscicollis, Phylogeny, CR1},
doi = {10.1016/j.ympev.2018.10.019},
url = {http://},
pmid = {30393184},
journal = {Molecular Phylogenetics and Evolution},
volume = {130},
number = {},
pages = {227--232},
abstract = {The Indian Cormorant (Phalacrocorax fuscicollis) is a common avian piscivore that occurs throughout the Indian subcontinent and east to southern Vietnam. Its evolutionary relationships, however, have remained obscure, largely because of a lack of material available for either osteological or genetic analysis. Here we show using DNA-sequence data from both nuclear and mitochondrial genes that this species is sister to the allopatric Little Black Cormorant (P. sulcirostris), which occurs from Java in the west through southern Indonesia and New Guinea to Australia and New Zealand in the south. We estimate this split to have happened 2.5?3.2 million years ago, during the late Pliocene. We also report on genetic variation within the mitochondrial control region, which suggests that this part of the genome may be useful in investigating if there is genetic structure across the geographical range of the Indian Cormorant.}
}
Taxa for Study 24388

Citation title:
"The phylogenetic placement of the enigmatic Indian Cormorant, Phalacrocorax fuscicollis (Phalacrocoracidae)".

Study name:
"The phylogenetic placement of the enigmatic Indian Cormorant, Phalacrocorax fuscicollis (Phalacrocoracidae)".

This study is part of submission 24388
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
3613813 |
Anhinga anhinga leucogaster |
|
591137
|
3613781 |
Gulosus aristotelis |
|
|
3613816 |
Leucocarbo albiventer a |
|
|
3613821 |
Leucocarbo atriceps b |
|
|
3613800 |
Leucocarbo bougainvillii |
0
|
6082135
|
3613817 |
Leucocarbo bransfieldensis |
|
|
3613811 |
Leucocarbo bransfieldensis c |
|
|
3613788 |
Leucocarbo campbelli |
|
|
3613809 |
Leucocarbo carunculatus |
|
5533086
|
3613798 |
Leucocarbo chalconotus |
|
6360369
|
3613775 |
Leucocarbo colensoi |
|
5639132
|
3613777 |
Leucocarbo georgianus |
|
|
3613814 |
Leucocarbo magellanicus |
|
|
3613785 |
Leucocarbo melanogenis |
|
|
3613812 |
Leucocarbo nivalis |
|
|
3613796 |
Leucocarbo onslowi |
|
|
3613778 |
Leucocarbo purpurascens |
|
|
3613807 |
Leucocarbo ranfurlyi |
|
5639131
|
3613783 |
Leucocarbo verrucosus |
|
|
3613784 |
Microcarbo melanoleucos |
|
|
3613791 |
Microcarbo pygmaeus |
0
|
6029850
|
3613787 |
Morus serrator |
57658
|
3851691
|
3613782 |
Nannopterum auritus |
|
|
3613799 |
Nannopterum brasilianus |
|
|
3613797 |
Nannopterum harrisi |
|
14223
|
3613815 |
Pelecanus occidentalis carolinensis |
|
591121
|
3613808 |
Phalacrocorax capensis |
146614
|
3851718
|
3613792 |
Phalacrocorax capillatus |
146617
|
3851716
|
3613793 |
Phalacrocorax carbo carbo |
9209
|
2475159
|
3613804 |
Phalacrocorax carbo lucidus |
|
24062
|
3613802 |
Phalacrocorax carbo novaehollandiae |
|
1692473
|
3613780 |
Phalacrocorax carbo sinensis |
|
1692471
|
3613786 |
Phalacrocorax featherstoni |
146622
|
3851736
|
3613820 |
Phalacrocorax fuscescens |
137255
|
3851710
|
3613794 |
Phalacrocorax fuscicollis |
|
|
3613790 |
Phalacrocorax neglectus |
|
3851709
|
3613819 |
Phalacrocorax nigrogularis |
170405
|
3851717
|
3613776 |
Phalacrocorax punctatus |
146624
|
3851735
|
3613779 |
Phalacrocorax sulcirostris |
9210
|
3851714
|
3613805 |
Phalacrocorax varius |
146621
|
3851713
|
3613789 |
Poikilocarbo gaimardi |
|
|
3613818 |
Poikilocarbo gaimardi d |
|
|
3613806 |
Poikilocarbo gaimardi e |
|
|
3613801 |
Sula sula |
57662
|
3851695
|
3613810 |
Urile pelagicus |
|
|
3613803 |
Urile penicillatus |
|
|
3613795 |
Urile urile |
|
|
3613824 |
fuscicollis Bheraghat C.P. India 461866 |
|
|
3613822 |
fuscicollis Sri Lanka 375842 |
|
|
3613823 |
fuscicollis Sri lanka IC4 |
|
|
3613825 |
fuscicollis Sri lanka IC5 |
|
|