@ARTICLE{TreeBASE2Ref30280,
author = {Eric de Camargo Smidt and Gerardo A Salazar and Anna Victoria Silv?rio R. Mauad and Mathias Erich Engels and JUAN Viruel and Mark Clements and Iv?n Jim?nez P?rez and Mark W Chase},
title = {An Indomalesian origin in the Miocene for the diphyletic New World jewel orchids (Goodyerinae, Orchidoideae): molecular dating and biogeographic analyses document non-monophyly of the Neotropical genera.},
year = {2021},
keywords = {Atlantic Forest ? biogeography? Meliorchis ? nrITS ? Neotropical flora ? matK? orchid molecular phylogenetics},
doi = {10.1093/botlinnean/boab028},
url = {http://},
pmid = {},
journal = {Botanical Journal of the Linnean Society},
volume = {197},
number = {3},
pages = {322--349},
abstract = {The jewel orchids (Goodyerinae), named for their often colourful leaves, have a pantropical distribution with a clear Asian centre of diversity. However, the Americas (including the Nearctic and Neotropics) still have one-third of the species. Previously, only a few American samples have been included in phylogenetic studies, and their putatively Asian origins and American divergence times are unknown. To elucidate these topics, we inferred phylogenetic trees using nuclear ribosomal ITS and plastid matK sequences for 34 species of Goodyerinae from the New World and 76 previously published accessions of Cranichideae. We performed molecular dating and biogeographical analyses. Our well-supported phylogenetic topology suggests two independent dispersal events to the New World from the Indomalesian region during the Miocene. The first inferred dispersal of a Neotropical clade diverged ~11 Ma from their most recent common ancestor (MRCA) and comprised three highly supported subclades that do not match the limits of the genera Aspidogyne, Kreodanthus, and Microchilus as previously circumscribed. The second dispersal involved a largely Nearctic clade of Goodyera s.l. diverging ~8.4 Ma from the MRCA and exhibiting a complex biogeographic history with subsequent dispersals between the Nearctic and Indomalesia. The occurrence of these species in gallery forests putatively prevented vicariance events imposed by the expansion of the Chacoan region as previously detected for epiphytic Orchidaceae. Eighty-nine nomenclatural combinations and three new names in Microchilus are proposed.}
}
Taxa for Study 25513

Citation title:
"An Indomalesian origin in the Miocene for the diphyletic New World jewel orchids (Goodyerinae, Orchidoideae): molecular dating and biogeographic analyses document non-monophyly of the Neotropical genera.".

Study name:
"An Indomalesian origin in the Miocene for the diphyletic New World jewel orchids (Goodyerinae, Orchidoideae): molecular dating and biogeographic analyses document non-monophyly of the Neotropical genera.".

This study is part of submission 25513
(Status: Published).
Taxa
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 4699346 |
Anoectochilus albolineatus |
|
|
| 4699395 |
Anoectochilus formosanus |
173437
|
5966693
|
| 4699401 |
Anoectochilus koshunensis |
533268
|
8992214
|
| 4699379 |
Aspidogine bidentifera |
|
|
| 4699374 |
Aspidogyne argentea |
|
|
| 4699362 |
Aspidogyne commelinoides |
|
|
| 4699386 |
Aspidogyne confusa |
|
|
| 4699359 |
Aspidogyne fimbrillaris |
|
|
| 4699414 |
Aspidogyne foliosa |
|
|
| 4699427 |
Aspidogyne juruenensis |
|
|
| 4699349 |
Aspidogyne kuczynskii |
|
|
| 4699354 |
Aspidogyne longicornu |
|
|
| 4699441 |
Aspidogyne metallescens |
|
|
| 4699433 |
Aspidogyne mystacina |
|
|
| 4699436 |
Aspidogyne platensis |
|
|
| 4699393 |
Aspidogyne pumila |
426772
|
3491251
|
| 4699366 |
Aspidogyne querceticola GAS6146 |
|
|
| 4699409 |
Aspidogyne querceticola O378 |
|
|
| 4699439 |
Aspidogyne rosea |
|
|
| 4699416 |
Aspidogyne stigmatoptera |
|
|
| 4699340 |
Aspidogyne utriculata |
|
|
| 4699396 |
Aulosepalum tenuiflorum |
|
8801623
|
| 4699428 |
Baskervilla colombiana |
415385
|
8619059
|
| 4699380 |
Baskervilla paranaensis |
|
|
| 4699353 |
Beloglottis costaricensis |
220580
|
8619075
|
| 4699408 |
Brachystele guayanensis |
|
|
| 4699378 |
Chamaegastrodia shikokiana |
|
|
| 4699385 |
Chloraea magellanica |
177022
|
5967194
|
| 4699384 |
Cotylolabium lutzii |
|
8872103
|
| 4699369 |
Cranichis apiculata |
415391
|
3491667
|
| 4699360 |
Cranichis muscosa |
415396
|
2663026
|
| 4699352 |
Cystorchis aphylla |
|
|
| 4699356 |
Cystorchis gracilis |
|
|
| 4699402 |
Deiregyne diaphana |
|
8877016
|
| 4699419 |
Dichromanthus aurantiacus |
220588
|
5972358
|
| 4699443 |
Discyphus scopulariae |
|
|
| 4699388 |
Dossinia marmorata |
220559
|
5972348
|
| 4699425 |
Eltroplectris calcarata |
|
8702086
|
| 4699351 |
Erythrodes blumei |
|
|
| 4699448 |
Erythrodes latifolia |
|
|
| 4699447 |
Eurystyles cotyledon |
426898
|
3492271
|
| 4699372 |
Funkiella hyemalis |
220593
|
11163311
|
| 4699373 |
Galeottiella sarcoglossa |
|
5777826
|
| 4699397 |
Gomphichis adnata |
|
|
| 4699387 |
Gonatostylis vieillardii |
152881
|
5768402
|
| 4699376 |
Goodyera biflora |
|
|
| 4699348 |
Goodyera bilamellata |
|
|
| 4699406 |
Goodyera daibuzanensis |
|
|
| 4699417 |
Goodyera epiphytic |
|
|
| 4699392 |
Goodyera kwangtungensis |
|
|
| 4699438 |
Goodyera major |
|
|
| 4699377 |
Goodyera marginata |
|
|
| 4699435 |
Goodyera oblongifolia |
|
2663071
|
| 4699444 |
Goodyera pendula |
|
|
| 4699430 |
Goodyera procera |
|
|
| 4699420 |
Goodyera proceraRyuku |
|
|
| 4699343 |
Goodyera pubescens |
78780
|
2663072
|
| 4699407 |
Goodyera pusilla |
|
|
| 4699410 |
Goodyera repens |
164261
|
2663073
|
| 4699383 |
Goodyera robusta |
|
|
| 4699440 |
Goodyera rubicunda |
|
|
| 4699367 |
Goodyera seikomontana |
|
|
| 4699347 |
Goodyera striata |
|
|
| 4699418 |
Goodyera tesselata |
|
2663074
|
| 4699445 |
Goodyera velutina |
164263
|
1884023
|
| 4699421 |
Goodyera viridiflora |
152882
|
5776543
|
| 4699403 |
Hetaeria heterosepala |
|
|
| 4699341 |
Hetaeria oblongifolia |
|
|
| 4699431 |
Hetaeria youngsayei |
|
|
| 4699361 |
Hylophila lanceolata |
|
|
| 4699363 |
Kreodanthus crispifolius |
|
|
| 4699429 |
Kreodanthus simplex |
651515
|
8912045
|
| 4699390 |
Kuhlhasseltia nakaiana |
|
|
| 4699389 |
Lankesterella ceracifolia |
|
8826427
|
| 4699370 |
Lepidogyne longifolia |
|
|
| 4699339 |
Ludisia discolor |
60011
|
5884464
|
| 4699357 |
Macodes petola |
|
|
| 4699364 |
Manniella gustavi |
220565
|
5972352
|
| 4699424 |
Microchilus arietinus |
651511
|
8601871
|
| 4699394 |
Microchilus austrobrasiliensis |
|
|
| 4699381 |
Microchilus caraguatatubensis |
|
|
| 4699382 |
Microchilus erythrodeoides |
|
|
| 4699412 |
Microchilus luniferus |
|
|
| 4699375 |
Microchilus sparreorum |
|
|
| 4699398 |
Microchilus tridax |
|
|
| 4699345 |
Microchilus vesicifer |
|
|
| 4699415 |
Microthelys constricta |
460395
|
8377452
|
| 4699399 |
Odontochilus montanus |
|
|
| 4699446 |
Odontorrhynchus variabilis |
176997
|
8936464
|
| 4699442 |
Pachyplectron arifolium |
78821
|
5768388
|
| 4699413 |
Pachyplectron neocaledonicum |
|
|
| 4699355 |
Pelexia orthosepala |
|
|
| 4699426 |
Platylepis polyadenia |
220561
|
5972349
|
| 4699344 |
Ponthieva diptera |
|
|
| 4699400 |
Prescottia plantaginea |
220573
|
1863921
|
| 4699368 |
Prescottia stachyodes |
415413
|
3493517
|
| 4699437 |
Pterichis galeata |
415414
|
8655469
|
| 4699432 |
Pterostylis curta |
177050
|
1884133
|
| 4699434 |
Sacoila lanceolata |
154543
|
621518
|
| 4699411 |
Sarcoglottis acaulis |
|
8627564
|
| 4699365 |
Sauroglossum elatum |
|
8741838
|
| 4699350 |
Schiedeella garayana |
|
|
| 4699423 |
Spiranthes romanzoffiana |
126264
|
2662982
|
| 4699342 |
Stenoptera ecuadorana |
220575
|
8977289
|
| 4699371 |
Svenkoeltzia congestiflora |
220606
|
8979178
|
| 4699405 |
Thelyschista ghillanyi |
|
|
| 4699404 |
Veyretia rupicola |
|
|
| 4699422 |
Vrydagzynea lancifolia |
|
|
| 4699391 |
Zeuxine gracilis |
|
|
| 4699358 |
Zeuxine strateumatica |
152920
|
2663165
|