@ARTICLE{TreeBASE2Ref30566,
author = {Vianney Tricou and Julie Bouscaillou and Gina Laure Laghoe-Nguembe and Aubin B?r? and Xavier Konamna and Benjamin S?l?kon and Emmanuel Nakoun? and Mirdad Kazanji and Narcisse Patrice Komas},
title = {Outbreak of Hepatitis E Virus Infections Associated with Rainfalls in the Central African Republic in 2008-2009},
year = {2020},
keywords = {Hepatitis E Virus, Waterborne Disease, Preventable Disease, Epidemiology, Central Africa},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Infectious Diseases},
volume = {},
number = {},
pages = {},
abstract = {Background: Infection by hepatitis E virus (HEV) can cause a high burden of morbidity
and mortality in countries with poor access to clean water and sanitation. Our study
aimed to investigate the situation of HEV infections in the Central African Republic
(CAR).
Methods: A retrospective analysis of the blood samples and notification forms collected
through the national yellow fever (YF) surveillance program, but for which a diagnosis
of YF was discarded, was carried out using an anti-HEV IgM ELISA and a HEV-specific
RT-PCR.
Results: Of 2,883 YF-negative samples collected between between January 2008 and
December 2012, 745 (~26%) tested positive by at least either of the 2 tests used to
confirm HEV cases. The results revealed that the CAR was hit by a large outbreak in
2008 and 2009. The results also showed a clear seasonal pattern with correlation
between HEV incidence and rainfall in Bangui. A phylogenetic analysis showed that
the circulating strains belonged to genotypes 1e and 2b.
Conclusions: Overall, this study provides further evidences that HEV can be a
significant cause of acute febrile jaundice, particularly among adults during rainy
season or flood, in a country from Sub-Saharan Africa.}
}
Taxa for tree 123395 of Study 25902
Citation title:
"Outbreak of Hepatitis E Virus Infections Associated with Rainfalls in the Central African Republic in 2008-2009".
Study name:
"Outbreak of Hepatitis E Virus Infections Associated with Rainfalls in the Central African Republic in 2008-2009".
This study is part of submission 25902
(Status: Published).
Taxa
Return to complete tree view
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 4068865 |
Hepatitis E virus 08.126_JN863910_JN863910 |
|
|
| 4068869 |
Hepatitis E virus 08.170_JN863909_JN863909 |
|
|
| 4068867 |
Hepatitis E virus 11.009_JQ074213_JQ074213 |
|
|
| 4068861 |
Hepatitis E virus 11.176_JN863908_JN863908 |
|
|
| 4068870 |
Hepatitis E virus 11.289_JQ740782_JQ740782 |
|
|
| 4068852 |
Hepatitis E virus 891_KR027891_KR027891 |
|
|
| 4068831 |
Hepatitis E virus CAR_08.336_KF734739_KF734739 |
|
|
| 4068866 |
Hepatitis E virus CAR_08.338_KF734740_KF734740 |
|
|
| 4068844 |
Hepatitis E virus CAR_08.344_KF734741_KF734741 |
|
|
| 4068863 |
Hepatitis E virus CAR_08.346_KF734742_KF734742 |
|
|
| 4068850 |
Hepatitis E virus CAR_08.418_KF734743_KF734743 |
|
|
| 4068858 |
Hepatitis E virus CAR_08.419_KF734744_KF734744 |
|
|
| 4068841 |
Hepatitis E virus CAR_08.432_KF734745_KF734745 |
|
|
| 4068857 |
Hepatitis E virus CAR_09.212_KF734760_KF734760 |
|
|
| 4068848 |
Hepatitis E virus CAR_09.226_KF734746_KF734746 |
|
|
| 4068835 |
Hepatitis E virus CAR_09.240_KF734747_KF734747 |
|
|
| 4068842 |
Hepatitis E virus CAR_09.248_KF734761_KF734761 |
|
|
| 4068843 |
Hepatitis E virus CAR_09.249_KF734751_KF734751 |
|
|
| 4068851 |
Hepatitis E virus CAR_09.251_KF734748_KF734748 |
|
|
| 4068854 |
Hepatitis E virus CAR_09.317_KF734749_KF734749 |
|
|
| 4068832 |
Hepatitis E virus CAR_09.671_KF734750_KF734750 |
|
|
| 4068849 |
Hepatitis E virus CAR_09.685_KF734752_KF734752 |
|
|
| 4068860 |
Hepatitis E virus CAR_09.695_KF734753_KF734753 |
|
|
| 4068828 |
Hepatitis E virus CAR_09.700_KF734754_KF734754 |
|
|
| 4068853 |
Hepatitis E virus CAR_09.733_KF734755_KF734755 |
|
|
| 4068833 |
Hepatitis E virus CAR_09.735_KF734756_KF734756 |
|
|
| 4068868 |
Hepatitis E virus CAR_09.744_KF734762_KF734762 |
|
|
| 4068846 |
Hepatitis E virus CAR_09.754_KF734757_KF734757 |
|
|
| 4068838 |
Hepatitis E virus CAR_09.758_KF734758_KF734758 |
|
|
| 4068839 |
Hepatitis E virus CAR_09.764_KF734759_KF734759 |
|
|
| 4068834 |
Hepatitis E virus D11092_D11092 |
|
|
| 4068836 |
Hepatitis E virus IND.HEV.AVH5.2010_JF443721_JF443721 |
|
|
| 4068830 |
Hepatitis E virus JKO.ChiSai98C_AB197673_AB197673 |
|
|
| 4068862 |
Hepatitis E virus M73218_M73218 |
|
|
| 4068847 |
Hepatitis E virus M74506_M74506 |
|
|
| 4068859 |
Hepatitis E virus Morocco_AY230202_AY230202 |
|
|
| 4068864 |
Hepatitis E virus NG.17.0500_MH809516_MH809516 |
|
|
| 4068837 |
Hepatitis E virus T3_AY204877_AY204877 |
|
|
| 4068856 |
Hepatitis E virus X98292_X98292 |
|
|
| 4068855 |
Hepatitis E virus bfaso13_MK412912_MK412912 |
|
|
| 4068871 |
Hepatitis E virus bfaso14_MK412913_MK412913 |
|
|
| 4068840 |
Hepatitis E virus bfaso1_MK412900_MK412900 |
|
|
| 4068845 |
Orthohepevirus A NG.17.0503_MH918640_MH918640 |
|
|
| 4068829 |
Swine hepatitis E virus Meng_AF082843_AF082843 |
|
|
Citation
Taxa
Matrices
Trees
Analyses
