@ARTICLE{TreeBASE2Ref15272,
author = {Sabina Donad?o and Liliana M. Giussani and Elizabeth A. Kellogg and Fernando O. Zuloaga and Osvaldo Morrone},
title = {A preliminary molecular phylogeny of Pennisetum and Cenchrus (Poaceae-Paniceae) based on the trnL-F, rpl16 chloroplast markers},
year = {2008},
keywords = {},
doi = {},
url = {},
pmid = {},
journal = {Taxon},
volume = {},
number = {},
pages = {},
abstract = {Pennisetum (80--140 species) and Cenchrus (16--22 species) are close related genera of Paniceae, both distributed in tropical and sub-tropical regions. The distinction between Pennisetum and Cenchrus is not clearly defined, and currently, no comprehensive taxonomic treatment is available for either genus. Chloroplast DNA sequence data (rpl16 and trnL-F region) were analyzed to test their monophyly, species relationships, and infrageneric classifications. Phylogenetic analyses of individual genomic regions, and a combined dataset, including indel-coded information, were performed under parsimony. Bayesian inference analyses were also performed for the individual and combined datasets. Selected geographical, chromosomal and diagnostic morphological characters were mapped onto the phylogeny to investigate evolutionary trends. Our results support a monophyletic bristle clade and the close relationship between Pennisetum and Cenchrus. Excluding Pennisetum lanatum, Pennisetum is paraphyletic because Cenchrus is nested within it. Sections Pennisetum and Gymnotrix are polyphyletic, while the relationship of other sections and the diagnostic characters used to identify infrageneric taxa, are also discussed. Our molecular phylogenetic results show a close relationship among the domesticated species P. glaucum, and P. purpureum, P. squamulatum, P. nervosum, and P. sieberianum, suggesting the potential use of these species in crop improvement. The Pennisetum-Cenchrus clade shows an independent reduction ( x = 5, 7, 8 ) or duplication ( x = 17 ) of the basic chromosome number from the ancestral x = 9. American Pennisetum and Cenchrus species appear to have originated from Old World species more than once during the evolution. A core group of American species of Cenchrus with a basic chromosome number of x = 17, and retrorsely barbed bristles could be restricted to Cenchrus s.s.}
}
Taxa for Study 2136

Citation title:
"A preliminary molecular phylogeny of Pennisetum and Cenchrus (Poaceae-Paniceae) based on the trnL-F, rpl16 chloroplast markers".

This study was previously identified under the legacy study ID S2140
(Status: Published).
Taxa
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 4235005 |
2090 Pim Theronia |
|
|
| 4234931 |
2565 Pim Theronia |
|
|
| 4234760 |
3311 856b |
|
|
| 4234909 |
Acaenitus dubitator |
|
|
| 4234813 |
Acaenitus sp |
|
|
| 4234985 |
Acerataspis sinensis |
|
|
| 4234936 |
Acourtia periplexa |
|
|
| 4235031 |
Acrodactyla |
290692
|
4056603
|
| 4234753 |
Acropimpla pictipes |
|
|
| 4234947 |
Acropimpla spA |
|
|
| 4234859 |
Acrotaphus |
493639
|
4449455
|
| 4234927 |
Aleiodes |
55939
|
4062392
|
| 4234785 |
Allomacrus |
493653
|
4063389
|
| 4235014 |
Alomya |
55943
|
4061939
|
| 4234905 |
Amazopimpla |
|
|
| 4234819 |
Anastelgis |
493670
|
4450706
|
| 4234778 |
Apechoneura |
494193
|
4073838
|
| 4234774 |
Apechthis |
65328
|
4073843
|
| 4234956 |
Aperileptus |
493679
|
4073927
|
| 4234834 |
Aphidius |
37852
|
4074356
|
| 4234894 |
Aplomerus |
|
4075315
|
| 4235036 |
Apoclima |
493681
|
4075504
|
| 4235021 |
Apophua |
144262
|
4074771
|
| 4234978 |
Aravenator |
|
|
| 4234907 |
Arotes |
|
|
| 4234868 |
Astiphromma |
493687
|
4082009
|
| 4234857 |
Atractogaster |
|
|
| 4234802 |
Augerella achterberti |
|
|
| 4234765 |
Augerella vriesi |
|
|
| 4234988 |
Banchus |
144268
|
4087245
|
| 4234885 |
Batakomacrus |
|
|
| 4234891 |
Biamosa barachek |
|
|
| 4234860 |
Bioblapsis |
493705
|
6564712
|
| 4234759 |
Brachycyrtus |
88439
|
4093861
|
| 4234794 |
Brachyzapus |
|
|
| 4234872 |
Buathra |
231878
|
4096089
|
| 4234879 |
Calliephialtes |
494171
|
4099431
|
| 4234815 |
Campocraspedon |
494173
|
4454012
|
| 4234938 |
Campoplegini gen sp nov |
|
|
| 4235034 |
Campoplex |
95272
|
4102041
|
| 4234914 |
Camptotypus |
494179
|
4102333
|
| 4234801 |
Carinibus molestus |
|
|
| 4234945 |
Catastenus |
572560
|
4105371
|
| 4234837 |
Certonotus |
|
|
| 4234766 |
Chablisea |
|
|
| 4234855 |
Chilocyrtus |
494197
|
4490163
|
| 4234973 |
Clistopyga |
95279
|
4119116
|
| 4234893 |
Cnastis |
494209
|
4455318
|
| 4234933 |
Coleocentrus |
273971
|
4121679
|
| 4234922 |
Coleocentrus gurnetensis |
|
|
| 4234772 |
Collyria |
65306
|
238164
|
| 4234921 |
Colpotrochia |
65254
|
4122500
|
| 4234990 |
Cotesia |
32390
|
4127034
|
| 4235002 |
Crusopimpla rediviva |
|
|
| 4234754 |
Crusopimpla tadushiensis |
|
|
| 4234948 |
Cylloceria B |
|
|
| 4234849 |
Cylloceria melancholica |
|
3384698
|
| 4234992 |
Dacnusa |
58730
|
2625741
|
| 4234920 |
Daschia |
|
|
| 4234964 |
Delomerista |
144301
|
4138189
|
| 4234873 |
Deuteroxorides |
494235
|
4140334
|
| 4234966 |
Diacritus aciculatus |
65319
|
5956149
|
| 4234993 |
Diaeretus |
78487
|
4140634
|
| 4234876 |
Dialipsis |
494237
|
4140712
|
| 4234835 |
Diaparsis |
494239
|
4140856
|
| 4234842 |
Dimophora |
494255
|
4143793
|
| 4234910 |
Diplazon rufoscutatus |
|
|
| 4235035 |
Diplazon scutatorius |
|
6865841
|
| 4235016 |
Dischysma maculata |
|
|
| 4234880 |
Dolichomitus imperator |
65331
|
3375074
|
| 4234987 |
Dolichomitus quercicolus |
|
|
| 4234981 |
Dolichomitus saxeus |
|
|
| 4234762 |
Dolichomitus sp2 |
|
|
| 4234797 |
Dreisbachia |
494261
|
4457370
|
| 4234836 |
Dusona |
65150
|
4150416
|
| 4234818 |
Echthromorpha agrestoria |
290691
|
5979817
|
| 4234814 |
Echthromorpha intricatoria |
|
|
| 4234874 |
Echthrus |
172491
|
4152372
|
| 4234944 |
Eclytus lutatus |
|
|
| 4234954 |
Endromopoda |
494326
|
4399598
|
| 4234863 |
Enizemum |
494328
|
4156452
|
| 4234976 |
Entypoma |
494330
|
4157234
|
| 4234808 |
Eopimpla grandis |
|
|
| 4234972 |
Ephialtes |
65332
|
4158359
|
| 4234827 |
Epirhyssa iiapensis |
|
|
| 4234793 |
Epirhyssa overlaeti |
|
9611064
|
| 4235010 |
Epirhyssa sp |
|
|
| 4234871 |
Epitheronia |
|
4458521
|
| 4234963 |
Eriostethus |
|
|
| 4234852 |
Eruga |
494336
|
4458670
|
| 4234968 |
Euceros |
65294
|
4162988
|
| 4234799 |
Eugalta |
273993
|
4164346
|
| 4234832 |
Eupelmophotismus |
|
4165989
|
| 4234758 |
Eusterinx arcuatus |
|
|
| 4234970 |
Eusterinx humalai |
|
|
| 4234850 |
Eusterinx oli |
|
|
| 4235032 |
Eusterinx ten |
|
|
| 4234812 |
Eusterinx vectensis |
|
|
| 4235013 |
Exeristes |
7411
|
4170178
|
| 4235015 |
Exochus sp |
|
|
| 4234984 |
Flacopimpla |
|
|
| 4234788 |
Flavopimpla |
494356
|
4170513
|
| 4234889 |
Fossatyloides |
|
|
| 4234831 |
Fredegunda |
|
|
| 4234822 |
Ganodes |
494361
|
4459738
|
| 4234776 |
Gasteruption |
32404
|
4175139
|
| 4234821 |
Gelis |
172486
|
4176044
|
| 4234883 |
Glypta transversalis |
|
|
| 4234804 |
Gnathochorisis |
494367
|
4179135
|
| 4234899 |
Gregopimpla |
494370
|
4460248
|
| 4234911 |
Grotea |
144338
|
211192
|
| 4234991 |
Helictes conspicuus |
494757
|
|
| 4234829 |
Helictes sp |
|
|
| 4235025 |
Hemiphanes erratum |
|
|
| 4234890 |
Hemiphanes performidatum |
|
|
| 4235030 |
Heteropelma |
494770
|
4193855
|
| 4234979 |
Homolobus |
64859
|
4197746
|
| 4234761 |
Homotropus |
|
4197964
|
| 4235024 |
Hybrizon |
65340
|
4200025
|
| 4234763 |
Hyperacmus |
231888
|
4201759
|
| 4235028 |
Hyposoter |
260304
|
4202919
|
| 4234937 |
Ichneumon |
27520
|
113830
|
| 4234977 |
Ichninsum appendicrassus |
|
|
| 4234961 |
Ischnoceros |
144351
|
4206976
|
| 4234958 |
Ischyrocnemis sp nov |
|
|
| 4234790 |
Iseropus |
494808
|
4207303
|
| 4234924 |
Ishigakia |
494810
|
4207319
|
| 4234869 |
Itoplectis |
65334
|
4208293
|
| 4234989 |
Itoplectis saxosus |
|
|
| 4234951 |
Jezarotes |
494814
|
4208887
|
| 4236480 |
Khasurtella buriatica |
|
|
| 4235004 |
Labenopimpla kasparyani |
|
|
| 4234901 |
Labium |
494824
|
4212113
|
| 4234862 |
Leptophion |
288198
|
4218549
|
| 4234844 |
Liotryphon |
494854
|
4222434
|
| 4235011 |
Lissopimpla |
494858
|
4223080
|
| 4234826 |
Lithoserix williamsi |
|
|
| 4234941 |
Lithotorus cressoni |
|
|
| 4234913 |
Longitibia |
|
4608101
|
| 4235022 |
MEI 11223 |
|
|
| 4234999 |
MEI 11324 |
|
|
| 4234900 |
Macrocentrus |
64862
|
4229021
|
| 4234903 |
Marjorietta disruptra |
|
|
| 4235039 |
Megaetaira |
495348
|
|
| 4234950 |
Megarhyssa |
65326
|
4235300
|
| 4235029 |
Megastylus |
144402
|
4235433
|
| 4234904 |
Mesoclistus |
|
9696581
|
| 4234856 |
Mesoclistus yamataroti |
|
|
| 4234779 |
Mesornatus markovici |
|
|
| 4234917 |
Metachorischizu |
|
|
| 4234955 |
Metopius |
494882
|
4240963
|
| 4234781 |
Micropimpla obscura |
|
|
| 4234845 |
Neoxorides |
65320
|
4408343
|
| 4234881 |
Netelia testacea |
|
|
| 4234882 |
Neurateles |
494901
|
4258132
|
| 4234824 |
Nomosphecia pyramida |
|
|
| 4234811 |
Nomosphecia sp |
|
|
| 4234789 |
Odontocolon |
144415
|
4408915
|
| 4234816 |
Opheltes |
273885
|
4267650
|
| 4234957 |
Orthocentrus defossus |
|
|
| 4234807 |
Orthocentrus mortuaria |
|
|
| 4234994 |
Orthocentrus scurra |
|
|
| 4234875 |
Orthocentrus sp |
|
|
| 4235020 |
Ortholaba |
495421
|
4510882
|
| 4234971 |
Orthopelma |
65304
|
4271210
|
| 4234982 |
Oxyrrhexis |
|
|
| 4235037 |
Palaeoichneumon ornatus |
|
|
| 4234906 |
Pantisarthrus |
495429
|
4278177
|
| 4234851 |
Paraperithous |
|
|
| 4235007 |
Parapimpla rhenana |
|
|
| 4234854 |
Parema |
144431
|
4471102
|
| 4234930 |
Perithous scurra |
273986
|
5799524
|
| 4234897 |
Perithous septemcinctorius |
|
|
| 4234995 |
Phaenolobus |
65316
|
4290985
|
| 4235009 |
Phaenolobus arvernus |
|
|
| 4234962 |
Phaeogenes |
274315
|
4291108
|
| 4234877 |
Pherhombus antennalis |
|
|
| 4234775 |
Phorotrophus |
495450
|
4294754
|
| 4234980 |
Phthorima |
495455
|
4295477
|
| 4234969 |
Phygadeuon petrifactellus |
|
|
| 4234798 |
Physotarsus adriani |
495458
|
6151328
|
| 4234770 |
Picrostigeus |
|
|
| 4235000 |
Pimpla antiqua |
|
|
| 4234996 |
Pimpla appendigera |
|
|
| 4234783 |
Pimpla bibosa |
|
|
| 4234777 |
Pimpla eocenica |
|
|
| 4234803 |
Pimpla flavicoxis |
495388
|
9626790
|
| 4235023 |
Pimpla longicornis |
|
|
| 4234942 |
Pimpla morticina |
|
|
| 4234823 |
Pimpla revelata |
|
|
| 4234858 |
Pimpla rufipes |
|
|
| 4234764 |
Pimpla seyrigi |
|
|
| 4234923 |
Pimpla stigmatica |
|
|
| 4235019 |
Pimplaetus |
495463
|
4297643
|
| 4234939 |
Piogaster |
495467
|
4472218
|
| 4235033 |
Plectiscidea |
495471
|
4298811
|
| 4234825 |
Plectiscidea lanhami |
|
|
| 4234809 |
Plectiscidea vetusta |
|
|
| 4234949 |
Plectiscus |
495474
|
3404545
|
| 4235038 |
Podoschistus |
495481
|
4472916
|
| 4234773 |
Poecilocryptus |
88436
|
4303603
|
| 4234830 |
Poemenia |
65322
|
4304802
|
| 4234925 |
Polyhelictes bipolarus |
|
|
| 4234817 |
Polysphincta atavina |
|
|
| 4234928 |
Polysphincta inundata |
|
|
| 4234847 |
Polysphincta petrorum |
|
|
| 4234929 |
Polysphincta purcelli |
|
|
| 4234892 |
Polysphincta tuberosa |
|
|
| 4234887 |
Pristomerus sp nov |
|
|
| 4234940 |
Procinetus |
273974
|
4309521
|
| 4234838 |
Proclitus |
65312
|
4309558
|
| 4234898 |
Proeliator |
|
|
| 4234943 |
Promethes |
495497
|
4309617
|
| 4234895 |
Pseudopimpla glabripropodeum |
|
|
| 4234806 |
Pseudopimpla pygidiator |
|
|
| 4234959 |
Pseudorhyssa |
65324
|
4317016
|
| 4234867 |
Ramulimonstrum intermedium |
|
|
| 4234967 |
Reclinervellus |
|
|
| 4234846 |
Rhyssa amoena |
274329
|
5978521
|
| 4234780 |
Rhyssa persuasoria |
|
|
| 4234756 |
Rhyssella |
144452
|
4332121
|
| 4234833 |
Rhyssella vera |
|
|
| 4234782 |
Rodrigama |
495531
|
4581658
|
| 4234805 |
Rossemia |
|
|
| 4234884 |
Rugopimpla fallax |
|
|
| 4234768 |
Rugopimpla vulgaris |
|
|
| 4234865 |
Scambus |
495602
|
4336810
|
| 4234915 |
Scambus fossilis |
|
|
| 4234998 |
Scambus fossilobus |
|
|
| 4234953 |
Scambus mandibularis |
|
|
| 4235008 |
Scambus parachuti |
|
|
| 4234935 |
Schachticraspedon |
|
|
| 4234861 |
Schizopyga |
65336
|
4338119
|
| 4234902 |
Scutellator macrommatus |
|
|
| 4234796 |
Scutellator spinatorius |
|
|
| 4234975 |
Sericopimpla |
495618
|
4341963
|
| 4234934 |
Sinarachna |
495628
|
4477073
|
| 4234896 |
Sphingozona |
|
|
| 4234810 |
Spilopteron occiputale |
|
|
| 4234791 |
Spilopteron tosaense |
|
|
| 4234784 |
Stenomacrus solidatus |
|
|
| 4234800 |
Stenomacrus sp2 |
|
|
| 4234769 |
Stenomacrus spA |
|
|
| 4234771 |
Strongylopsis |
|
4356320
|
| 4234848 |
Sussaba |
495652
|
4358411
|
| 4234787 |
Symplecis |
495657
|
4359344
|
| 4234886 |
Syrphoctonus |
495668
|
4360667
|
| 4234786 |
Syrphophilus |
495671
|
4478456
|
| 4236481 |
Tanychora petiolata |
|
|
| 4234912 |
Terminator |
|
|
| 4234878 |
Theronia clathrata |
|
|
| 4234960 |
Theronia hilaris |
|
|
| 4234965 |
Theronia wickhami |
|
|
| 4234983 |
Thymaris negligere |
|
|
| 4234853 |
Thymaris senilis |
|
|
| 4235003 |
Ticapimpla |
|
4589338
|
| 4234839 |
Tilgidopsis heaesitans |
|
|
| 4234916 |
Tobiasites striatus |
|
|
| 4234997 |
Townesion mandibularis |
|
|
| 4235001 |
Triancyra |
144475
|
6237768
|
| 4234841 |
Trigonator macrocheirus |
|
|
| 4234864 |
Tromatobia |
65338
|
4378915
|
| 4234866 |
Trymectus amasidis |
|
|
| 4234974 |
Tryphon |
256611
|
4375890
|
| 4234926 |
Tryphopimpla xoridoptera |
|
|
| 4234919 |
Tymmophorus |
495705
|
4381030
|
| 4234767 |
Woldstedtius |
495713
|
4593230
|
| 4234986 |
Xanthophenax concolor |
|
|
| 4235026 |
Xanthophenax sp |
|
|
| 4234932 |
Xanthopimpla biamosa |
|
|
| 4234946 |
Xanthopimpla conica |
|
|
| 4235027 |
Xanthopimpla messelensis |
|
|
| 4234828 |
Xanthopimpla praeclara |
|
|
| 4234908 |
Xanthopimpla spG |
|
|
| 4234820 |
Xanthopimpla varimaculata |
|
9634177
|
| 4234840 |
Xenoschesis |
65270
|
4383027
|
| 4235006 |
Xestopelta |
495724
|
4481487
|
| 4235017 |
Xorides |
55941
|
4383780
|
| 4234792 |
Xorides sejugatus |
|
|
| 4234755 |
Yamatarotes |
495731
|
4384396
|
| 4234757 |
Yezoceryx |
495733
|
4384477
|
| 4234795 |
Zabrachypus |
495735
|
4384658
|
| 4234870 |
Zabrachypus tumidus |
|
|
| 4234843 |
Zaglyptus |
144498
|
4384806
|
| 4234888 |
Zagryphus nasutus |
|
3375598
|
| 4234918 |
Zagryphus tilloyi |
|
|
| 4234952 |
Zatypota kauros |
|
|
| 4235018 |
Zatypota percontatoria |
|
|
| 4235012 |
Zonopimpla |
495746
|
4386374
|