TreeBASE Search-Trees for study 16761

@ARTICLE{TreeBASE2Ref23961, author = {Fang Liu and Bevan S Weir and Ulrike Damm and Pedro W. Crous and Yong Wang and Bingxuan Liu and Zhang Meng and Lei Cai}, title = {Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex}, year = {2015}, keywords = {Camellia, Colletotrichum, morphology, phylogeny, tea plants}, doi = {10.3767/003158515X687597}, url = {http://}, pmid = {}, journal = {Persoonia}, volume = {35}, number = {}, pages = {63--86}, abstract = {We investigated the phylogenetic diversity of 144Colletotrichumisolates associated withsymptomatic and asymptomatic tissues of Camellia sinensis and other Camellia spp. from seven provinces in China (Fujian, Guizhou, Henan, Jiangxi, Sichuan, Yunnan, Zhejiang), and sevenisolates obtained from other countries, including Indonesia, UK, and the USA. Based on the multi-locus(ACT, CAL, GAPDH, GS, ITS, TUB2) phylogenetic analysesand phenotypic characters, 11 species weredistinguished, including ninewell-characterisedspecies (i.e., C. alienum, C. boninense, C. cliviae, C. fioriniae, C. fructicola, C. gloeosporioides, C. karstii, C. siamense), one which was epitypified (C. camelliae), and two novel species (C. henanense and C. jiangxiense). Of these, C. camelliae proved to be the most dominant andprobably host specifictaxon occurring on Camellia. Colletotrichum jiangxienseis shown to be phylogenetically closely related to the coffee berry pathogen C. kahawae subsp. kahawae.Pathogenicity testsand pairwise homoplasy index test suggest that C. jiangxiense and C. kahawae subsp. kahawae are two independent species. This study represents the first reports of C. alienum and C. cliviae occurring on Camellia sinensis. In addition, our study demonstrated that the combineduse of ApMat and GS loci in phylogenetic analysis is able to resolve all currently accepted species in the C. gloeosporioides species complex.} }

Delicious

Connotea

Trees for Study 16761

Citation title: "Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex".

Study name: "Unravelling Colletotrichum species associated with Camellia, with the combined use of ApMat and GS loci to resolve species in the C. gloeosporioides complex".

This study is part of submission 16761 (Status: Published).

Trees

ID	Tree Label	Tree Title	Tree Type	Tree Kind	Taxa
Tr79982	Fig. 2	Colletotrichum Fig. 2 act gapdh its tub	Single	Species Tree	View Taxa
Tr94202	Fig. S1	Colletotrichum Fig. S1 ACT CAL GAPDH ITS TUB GS	Single	Species Tree	View Taxa
Tr79981	Fig. 2	Colletotrichum Fig. 2 act gapdh its tub	Single	Species Tree	View Taxa
Tr79985	Fig. 3	Colletotrichum Fig. 3 & Fig. S2 apmat	Single	Species Tree	View Taxa
Tr79990	Fig. 4	Colletotrichum Fig. 4 apmat Gus	Single	Species Tree	View Taxa
Tr79986	Fig. 3	Colletotrichum Fig. 3 & Fig. S2 apmat	Single	Species Tree	View Taxa
Tr79980	Fig. 1	Colletotrichum Fig. 1 ACT CAL GAPDH ITS TUB2 GS	Single	Species Tree	View Taxa