@ARTICLE{TreeBASE2Ref26018,
author = {Maria Carolina Bento and Catarina Isabel Eira and Jose Vitor Vingada and Ana Luisa Mar?alo and Marisa Cl?udia Ferreira and Alfredo Lopez Fernandez and Luis Manuel Tavares and Ana Isabel Duarte},
title = {New insight into dolphin morbillivirus phylogeny and epidemiology in the northeast Atlantic: opportunistic study in cetaceans stranded along the Portuguese and Galician coasts.},
year = {2016},
keywords = {Cetacean morbillivirus, Dolphin morbillivirus, Striped dolphins, Eastern Atlantic.},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Veterinary Research},
volume = {},
number = {},
pages = {},
abstract = {Screening Atlantic cetacean populations for Cetacean Morbillivirus (CeMV) is essential to understand the epidemiology of the disease. In Europe, Portugal and Spain have the highest cetacean stranding rates, mostly due to the vast extension of coastline. Morbillivirus infection has been associated with high morbidity and mortality in cetaceans, especially in outbreaks reported in the Mediterranean Sea. However, scarce information is available regarding this disease in cetaceans from the North-East Atlantic populations. The presence of CeMV genomic RNA was investigated by reverse transcription-quantitative PCR in samples from 279 specimens stranded along the Portuguese and Galician coastlines collected between 2004 and 2015.
A total of sixteen animals (n=16/279, 5.7%) were positive. The highest prevalence of DMV was registered in striped dolphins (Stenella coeruleoalba) (n=14/69; 20.3%), slightly higher in those collected in Galicia (n=8/33; 24.2%) than in Portugal (n=6/36; 16.7%).
Phylogenetic analysis revealed that, despite the low genetic distances between samples, the high posterior probability (PP) values obtained strongly support the separation of the Portuguese and Galician sequences in an independent branch, separately from samples from the Mediterranean and the Canary Islands.
}
}
Matrices for Study 19466

Citation title:
"New insight into dolphin morbillivirus phylogeny and epidemiology in the northeast Atlantic: opportunistic study in cetaceans stranded along the Portuguese and Galician coasts.".

Study name:
"New insight into dolphin morbillivirus phylogeny and epidemiology in the northeast Atlantic: opportunistic study in cetaceans stranded along the Portuguese and Galician coasts.".

This study is part of submission 19466
(Status: Published).
Matrices
| ID |
Matrix Title |
Description |
Data type |
NTAX |
NCHAR |
Taxa |
|
|
|
|
|
M36996
|
Dolphin morbillivirus DNA concatenated alignment |
Alignment for genes N-P-F-H |
Nucleic Acid |
13 |
1166 |
View Taxa
|
|
|
|
|
|
M36993
|
Dolphin morbillivirus H gene alignment |
alignment for H gene |
Nucleic Acid |
20 |
276 |
View Taxa
|
|
|
|
|
|
M36994
|
Dolphin morbillivirus AA concatenated alignment |
Alighment for proteins N-P-F-H |
Amino Acid |
13 |
540 |
View Taxa
|
|
|
|
|
|
M36995
|
Dolphin morbillivirus N gene alignment |
Alignment for N gene |
Nucleic Acid |
18 |
179 |
View Taxa
|
|
|
|
|
|
M36991
|
Dolphin morbillivirus P gene alignment |
alignment for P gene |
Nucleic Acid |
36 |
309 |
View Taxa
|
|
|
|
|
|
M36992
|
Dolphin morbillivirus F gene alignment |
alignment for F gene |
Nucleic Acid |
15 |
369 |
View Taxa
|
|
|
|
|