Matrix 57825 of Study 27596
Matrices
Title: Fig. S2A Diplodia ITS alignment
Rows
Taxon Label | Row Segments | Characters 1?–30 |
---|---|---|
Diplodia africana CBS 120835 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia africana CBS 121104 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia afrocarpi CBS 131681 | (none) | ???????????????????????CATCT-C |
Diplodia agrifolia CBS 132777 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia agrifolia CBS 132778 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia agrifolia CBS 132779 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia agrifolia CBS 132841 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia allocellula CBS 130408 | (none) | ???TTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia allocellula CBS 130410 | (none) | ???TTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia arengae MFLU 17 2769 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia bulgarica CBS 124135 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia bulgarica CBS 124136 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia bulgarica CBS 124254 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia citricarpa CBS 124713 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia citricarpa CBS 124714 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia citricarpa CBS 124715 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia corticola Bot 08 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CAA 499 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CAA 691 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112071 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112072 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112073 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112074 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112547 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112548 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112549 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112550 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112551 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola CBS 112552 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola UCROK 1482 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia corticola UCROK 946 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia cupressi CBS 120691 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 120692 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 120693 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 121027 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 168.87 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 261.85 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia cupressi CBS 684.79 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia eriobotryicola CBS 140851 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia eriobotryicola CPC_29680 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia estuarina CBS 131682 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia estuarina CBS 139666 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia estuarina CBS 139668 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CBS 136010 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CBS 136011 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CBS 136012 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CBS 431.82 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CPC 34847 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CPC 34848 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CPC 34849 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia fraxini CPC 35401 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia gallae BL36 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae BL37 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae CBS 119935 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae CBS 163.33 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae CBS 211.25 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae CBS 212.25 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae CBS 213.25 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia gallae Dg1 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia malorum BL127 | (none) | GAGTTCT-CGAGCTCCGGCTCGA-ATCT-C |
Diplodia malorum CBS 112554 | (none) | GAGTTCT-CGAGCTCCGGCTCGA-ATCT-C |
Diplodia malorum CBS 124129 | (none) | GAGTTCT-CGAGCTCCGGCTCGA-ATCT-C |
Diplodia malorum CBS 124130 | (none) | GAGTTCT-CGAGCTCCGGCTCGA-ATCT-C |
Diplodia malorum CBS 124253 | (none) | GAGTTCT-CGAGCTCCGGCTCGA-ATCT-C |
Diplodia mutila CBS 112553 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 112875 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 120834 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 125.37 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 136014 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 136015 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 136016 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 136017 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila CBS 255.79 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila was magnoliigena MFLU 18 2214 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila was pyri CBS 121862 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia mutila was pyri CPC 29891 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Diplodia neojuniperi B0032 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia neojuniperi CBS 138652 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia olivarum CAP257 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia olivarum CBS 121886 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia olivarum CBS 121887 | (none) | GAGTTCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata CBS 124906 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata CBS 124907 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata CBS 125527 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was alatafructa CBS 124931 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was alatafructa CBS 124932 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was alatafructa CBS 124933 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was insularis BN 55 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was insularis CBS 140350 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia pseudoseriata was pseudoplatani GUCC G603 1 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCTCC |
Diplodia quercivora CBS 133852 | (none) | GAGTGCTACGAGCGAAAGCTCGTTACCT-C |
Diplodia quercivora CBS 133853 | (none) | GAGTGCTACGAGCGAAAGCTCGTTACCT-C |
Diplodia rosulata CBS 116470 | (none) | GAGTCCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia rosulata CBS 116472 | (none) | GAGTCCT-CGAGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 114863 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 117348 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 119938 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 121105 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 129172 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 136778 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 138184 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 295.38 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 393.84 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CBS 591.84 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CPC 29861 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea CPC 32394 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was intermedia CBS 112556 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was intermedia CBS 124134 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was intermedia CBS 124462 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was italica CBS 428.71 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was italica MFLUCC 14 1007 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was rosacearum CBS 141915 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sapinea was rosacearum NB8 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 109944 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 113297 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 113423 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 117836 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 118110 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CBS 139796 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata CMW 189 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata was guayanensis CBS 119939 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata was guayanensis CBS 129749 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata was guayanensis CBS 129750 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata was guayanensis CBS 129760 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia scrobiculata was guayanensis CMW 8746 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 100565 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 106.84 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110488 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110498 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110854 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110868 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110870 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110878 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 110879 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 112555 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 112661 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 112876 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-CTCT-C |
Diplodia seriata CBS 113506 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 113509 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 113511 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 113525 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 114793 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-CTCT-C |
Diplodia seriata CBS 114796 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 114797 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 119049 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 119130 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-A |
Diplodia seriata CBS 121106 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121107 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121108 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121109 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121110 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121425 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121485 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121884 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 121885 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 124137 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 124138 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 124139 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 129227 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 134016 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 134700 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 134701 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 140890 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 140891 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 177.26 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 215.25 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CBS 585.50 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CPC 29849 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CPC 30266 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CPC 30268 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CPC 30978 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia seriata CPC 35496 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia sp. 1 CBS 678.88 | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia sp. 1 UCD1275So | (none) | GAGTGCTACGAGCGAGAGCTCGTTACCT-C |
Diplodia subglobosa CBS 124131 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia subglobosa CBS 124132 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia subglobosa CBS 124133 | (none) | GAGTTCT-CGGGCTTCGGCTCGA-ATCT-C |
Diplodia tsugae CBS 418.64 | (none) | GAGTTCT-CGGGCTTCGGCCCGA-ATCT-C |
Lasiodiplodia theobromae CBS 164.96 | (none) | GAGTTTT-CGAGCTCCGGCTCGA-CTCT-C |
Columns
None of the columns has a description.