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Citation
Taxa
Matrices
Trees
Analyses
Matrix 57864 of Study 15034
Citation title: "Explosive diversification following a benthic to pelagic shift in freshwater fishes".
Study name: "Explosive diversification following a benthic to pelagic shift in freshwater fishes".
This study is part of submission 15034
(Status: Published).
Matrices
Title: Fig. S3B Dothiorella TEF1 alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Dothiorella acacicola CBS 141295 | (none) | ?????????????????????????????? |
| Dothiorella acericola HNXX032 | (none) | ?AAAA---TTTTCTGCT-CTGCACTG---G |
| Dothiorella acericola KUMCC 18 0137 | (none) | ?????????????????????????????? |
| Dothiorella alpina CGMCC 3.18001 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella brevicollis CBS 130411 | (none) | AACTT---TTTCCTGCTCCTGCACTG---G |
| Dothiorella brevicollis CBS 130412 | (none) | ?????????????????????????????? |
| Dothiorella californica CBS 119635 | (none) | AAC-----TTTTTCGCTCCTTCA------- |
| Dothiorella californica CBS 141587 | (none) | AAC-----TTTATCGCTCCTT--------- |
| Dothiorella capri amissi CBS 121763 | (none) | TGCTC---TTTTCCGCTCCTGCACTG---- |
| Dothiorella capri amissi CBS 121878 | (none) | TGCTC---TTTTCCGCTCCTGCACTG---- |
| Dothiorella casuarinae CBS 120688 | (none) | ?????????????????????????????? |
| Dothiorella casuarinae CBS 120689 | (none) | ?????????????????????????????? |
| Dothiorella casuarinae CBS 120690 | (none) | ?????????????????????????????? |
| Dothiorella citricola CBS 124728 | (none) | CAAAT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella citricola CBS 124729 | (none) | CAAAT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella citricola CBS 130415 | (none) | ???????????????????????CCG---G |
| Dothiorella diospyricola CBS 145972 | (none) | AACTT---TTTCCTGCTCCTGCACTG---G |
| Dothiorella dulcispinae CBS 121764 | (none) | AACTC----TTCCCGCACTTGCACTGCTGG |
| Dothiorella dulcispinae CBS 130413 | (none) | AACTC----TTCCCGCACTTGCACTGCTGG |
| Dothiorella dulcispinae was oblonga CBS 121765 | (none) | ACCTC----TTCCCGCACTTGCACTGCTGG |
| Dothiorella dulcispinae was oblonga CBS 121766 | (none) | ACCTC----TTCCCGCACTTGCACTGCTGG |
| Dothiorella dulcispinae was oblonga CBS 130414 | (none) | ?????????????????????????????? |
| Dothiorella guttulata CBS 134886 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella guttulata CBS 134888 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 113189 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115035 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115036 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115037 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115039 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115040 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 115041 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 121001 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 130984 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica CBS 133500 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica PD257 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica UCD1448SLO | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica UCR DI3 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica UCROK1227 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iberica UCROK1396 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella iranica CBS 124722 | (none) | ACCTC--TTTCCCCGTCCTTGCACTG--GC |
| Dothiorella italica CBS 115038 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CBS 122805 | (none) | ?????????????????????????????? |
| Dothiorella italica CBS 122806 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CBS 910.73 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CPC 30616 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CPC 33887 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CPC 35506 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica CPC 35540 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella italica MFLUCC 17 0951 | (none) | ?????????????????????????????? |
| Dothiorella lampangensis MFLUCC 18 0232 | (none) | AACTT---TTTCCTGCTCCTGCACTG---G |
| Dothiorella longicollis CBS 122066 | (none) | AGCTT---TTTCCTACTCCTGCACTG---G |
| Dothiorella longicollis CBS 122067 | (none) | AGCTT---TTTCCTACTCCTGTACTG---G |
| Dothiorella longicollis CBS 122068 | (none) | AGCTT---TTTCCTACTCCTGTACTG---G |
| Dothiorella magnoliae CFCC 51563 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella magnoliae CFCC 51564 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella mangifericola CBS 124726 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella mangifericola CBS 124727 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella mangifericola was rosulata CBS 121760 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella mangifericola was rosulata CBS 121761 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella moneti MUCC505 | (none) | TGCTC---TCTTCCGCTCCAGCACCG---- |
| Dothiorella omnivora CBS 124716 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella omnivora CBS 140349 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella omnivora CBS 188.87 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella parva CBS 124720 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella parva CBS 124721 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella parva CBS 134885 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella parva CBS 134887 | (none) | AAC-----TTTTTTGCTCCTT--------- |
| Dothiorella plurivora CBS 124724 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella pretoriensis CBS 130404 | (none) | CGCTC--TTTTCCCGCTCCTGCACCG---- |
| Dothiorella prunicola CBS 124723 | (none) | AACTT-------CTGCTCTTGCACCG---C |
| Dothiorella eriobotryae was rhamni CBS 145976 | (none) | AACTT-----TTTCGCTCTTCCACTC---- |
| Dothiorella eriobotryae CBS 140852 | (none) | AACTT-----ATTCGCTCTTTCACTC---- |
| Dothiorella santali MUCC509 | (none) | TTTTC---TCCTCCGCTCCAGCACCG---- |
| Dothiorella sarmentorum CBS 164.33 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella sarmentorum CPC 31043 | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella sarmentorum IMI 63581b | (none) | AAC-----TTTTCCGCTCCTT--------- |
| Dothiorella sarmentorum was americana CBS 128309 | (none) | AACT----TTTTCCGCTCTTT--------- |
| Dothiorella sarmentorum was americana CBS 128310 | (none) | ?????????????????????????????? |
| Dothiorella sempervirentis CBS 124718 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella sempervirentis CBS 124719 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella sp. 1 CBS 121783 | (none) | AGCTC--TTTTCCCGCTCCCGCATCG---- |
| Dothiorella sp. 1 CBS 121784 | (none) | AGCTC--TTTTCCCGCTCCCGCATCG---- |
| Dothiorella sp. 1 CBS 121785 | (none) | AGCTC--TTTTCCCGCTCCCGCATCG---- |
| Dothiorella striata CBS 124730 | (none) | TGCTT---TTCCCGCTCTTTGCACCG---G |
| Dothiorella striata CBS 124731 | (none) | TGCTT---TTCCCGCTCTTTGCACCG---G |
| Dothiorella striata was neclivorem DAR 80992 | (none) | TGCTT---TTCCCGCTCTTTGCACCG---G |
| Dothiorella symphoricarpicola CBS 135622 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CBS 135623 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CBS 135847 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CPC 30972 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CPC 30976 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CPC 31033 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola CPC 33923 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella symphoricarpicola MFLUCC 13 0497 | (none) | AAC-----TTTTTTACTCCTT--------- |
| Dothiorella tectonae MFLUCC 18 0382 | (none) | AACTA----CTTTTATTCCTGCACCG---G |
| Dothiorella thailandica CBS 133991 | (none) | AACTT----CTTCCACTCTTACACTGCTGG |
| Dothiorella thripsita CBS 125445 | (none) | CTCTT---TTTCCCGCTCCTGCACCG---- |
| Dothiorella ulmacea CBS 138855 | (none) | AACTT----TTTCCTCCCTCGCACCC---G |
| Dothiorella ulmacea CBS 140005 | (none) | AACTT----TTTCCTCCCTCGCACCC---G |
| Dothiorella ulmacea CBS 141414 | (none) | AACTT----TTTCCTCCCTCGCACCC---G |
| Dothiorella uruguayensis CBS 124908 | (none) | GACTT---TTCCCGTCCTTTGCACCG---G |
| Dothiorella vidmadera CPC 30614 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella vidmadera DAR 78992 | (none) | AACT----TTTTTCGCTCCTT--------- |
| Dothiorella vinea gemmae CPC 29689 | (none) | AGCTC----ATTCCACTCCTGCACTG---G |
| Dothiorella vinea gemmae DAR 81012 | (none) | AGCTC----ACTCCACTCCTGCACTG---G |
| Dothiorella viticola CBS 112869 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CBS 117006 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella viticola CBS 117007 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CBS 117008 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CBS 117009 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CBS 120999 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella viticola CMW 37930 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CMW 37931 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CMW 37933 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CPC 33136 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola CPC 33257 | (none) | CAATT---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola was westralis DAR 80529 | (none) | CAA-T---TTTCCTACTCCTGCAACG---G |
| Dothiorella viticola was westralis WA10NO03 | (none) | CAA-T---TTTCCTACTCCTGCAACG---G |
| Dothiorella yunnana CGMCC 3.17999 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Dothiorella yunnana CGMCC 3.18000 | (none) | CAATT---TTTCCTGCTCCTGCACCG---G |
| Neofusicoccum luteum CBS 121482 | (none) | TTTTTCGTTCCGCTGCCCGCGCGATG---G |
Columns
None of the columns has a description.
