@ARTICLE{TreeBASE2Ref31676,
author = {Wu Zhang and Johannes (Ewald) Zacharias Groenewald and Lorenzo Lombard and Rene K. Schumacher and Alan John Lander Phillips and Pedro W. Crous},
title = {Evaluating species in Botryosphaeriales},
year = {2021},
keywords = {Multi-Locus Sequence Typing (MLST); canker and leaf spot pathogens; new taxa; systematics},
doi = {10.3767/persoonia.2021.46.03},
url = {http://doi.org/10.3767/persoonia.2021.46.03},
pmid = {},
journal = {Persoonia},
volume = {46},
number = {},
pages = {63--115},
abstract = {The Botryosphaeriales (Dothideomycetes) includes numerous endophytic, saprobic, and plant pathogenic species associated with a wide range of symptoms, most commonly on woody plants. In a recent phylogenetic treatment of 499 isolates in the culture collection (CBS) of the Westerdijk Institute, we evaluated the families and genera accommodated in this order of important fungi. The present study presents multigene phylogenetic analyses for an additional 230 isolates, using ITS, tef1, tub2, LSU and rpb2 loci, in combination with morphological data. Based on these data, 58 species are reduced to synonymy, and eight novel species are described. They include Diplodia afrocarpi (Afrocarpus, South Africa), Dothiorella diospyricola (Diospyros, South Africa), Lasiodiplodia acaciae (Acacia, Indonesia), Neofusicoccum podocarpi (Podocarpus, South Africa), N. rapaneae (Rapanea, South Africa), Phaeobotryon ulmi (Ulmus, Germany), Saccharata grevilleae (Grevillea, Australia) and S. hakeiphila (Hakea, Australia). The results have clarified the identity of numerous isolates that lacked Latin binomials or had been deposited under incorrect names in the CBS collection in the past. They also provide a solid foundation for more in-depth future studies on taxa in the order. Sequences of the tef1, tub2 and rpb2 genes proved to be the most reliable markers. At the species level, results showed that the most informative genes were inconsistent, but that a combination of four candidate barcodes (ITS, tef1, tub2 and rpb2) provided reliable resolution. Furthermore, given the large number of additional isolates included in this study, and newly generated multigene DNA datasets, several species could also be reduced to synonymy. The study illustrates the value of reassessing the identity of older collections in culture collections utilising modern taxonomic frameworks and methods.}
}
Taxa for matrix 57885 of Study 27596

Citation title:
"Evaluating species in Botryosphaeriales".

Study name:
"Evaluating species in Botryosphaeriales".

This study is part of submission 27596
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
4353454 |
Cophinforma eucalypti CBS 117451 |
|
|
4353455 |
Neoscytalidium dimidiatum 10 B05 |
108428
|
9730531
|
4353465 |
Neoscytalidium dimidiatum 10 B08 |
108428
|
9730531
|
4353472 |
Neoscytalidium dimidiatum 10 B10 |
108428
|
9730531
|
4353501 |
Neoscytalidium dimidiatum 10 H59 |
108428
|
9730531
|
4353510 |
Neoscytalidium dimidiatum 10 J79 |
108428
|
9730531
|
4353512 |
Neoscytalidium dimidiatum 10 J81 |
108428
|
9730531
|
4353459 |
Neoscytalidium dimidiatum 10 J83 |
108428
|
9730531
|
4353487 |
Neoscytalidium dimidiatum 10 J86 |
108428
|
9730531
|
4353516 |
Neoscytalidium dimidiatum 2 D53 |
108428
|
9730531
|
4353494 |
Neoscytalidium dimidiatum 2 D54 |
108428
|
9730531
|
4353509 |
Neoscytalidium dimidiatum 2 D56 |
108428
|
9730531
|
4353456 |
Neoscytalidium dimidiatum 2 D60 |
108428
|
9730531
|
4353458 |
Neoscytalidium dimidiatum 2 D61 |
108428
|
9730531
|
4353503 |
Neoscytalidium dimidiatum 2 D76 |
108428
|
9730531
|
4353461 |
Neoscytalidium dimidiatum 2 D77 |
108428
|
9730531
|
4353488 |
Neoscytalidium dimidiatum 2 D79 |
108428
|
9730531
|
4353517 |
Neoscytalidium dimidiatum 278 |
108428
|
9730531
|
4353491 |
Neoscytalidium dimidiatum 282 |
108428
|
9730531
|
4353496 |
Neoscytalidium dimidiatum 2D57 |
108428
|
9730531
|
4353463 |
Neoscytalidium dimidiatum 3 F67 |
108428
|
9730531
|
4353486 |
Neoscytalidium dimidiatum 3 F68 |
108428
|
9730531
|
4353483 |
Neoscytalidium dimidiatum 3 F69 |
108428
|
9730531
|
4353497 |
Neoscytalidium dimidiatum 3 F70 |
108428
|
9730531
|
4353513 |
Neoscytalidium dimidiatum 3 F71 |
108428
|
9730531
|
4353485 |
Neoscytalidium dimidiatum 5 B45 |
108428
|
9730531
|
4353492 |
Neoscytalidium dimidiatum 7 H09 |
108428
|
9730531
|
4353498 |
Neoscytalidium dimidiatum 7E61 |
108428
|
9730531
|
4353493 |
Neoscytalidium dimidiatum 7E62 |
108428
|
9730531
|
4353518 |
Neoscytalidium dimidiatum 7E63 |
108428
|
9730531
|
4353470 |
Neoscytalidium dimidiatum 9 F36 |
108428
|
9730531
|
4353507 |
Neoscytalidium dimidiatum CBS 125608 |
|
|
4353504 |
Neoscytalidium dimidiatum CBS 125609 |
|
|
4353499 |
Neoscytalidium dimidiatum CBS 125610 |
|
|
4353508 |
Neoscytalidium dimidiatum CBS 125611 |
|
|
4353460 |
Neoscytalidium dimidiatum CBS 125617 |
|
|
4353505 |
Neoscytalidium dimidiatum CBS 125619 |
|
|
4353500 |
Neoscytalidium dimidiatum CBS 125622 |
|
|
4353484 |
Neoscytalidium dimidiatum CBS 125623 |
|
|
4353479 |
Neoscytalidium dimidiatum CBS 125695 |
|
|
4353475 |
Neoscytalidium dimidiatum CBS 125808 |
|
|
4353511 |
Neoscytalidium dimidiatum CBS 137.77 |
|
|
4353519 |
Neoscytalidium dimidiatum CBS 145.78 |
|
|
4353481 |
Neoscytalidium dimidiatum CBS 251.49 |
|
|
4353480 |
Neoscytalidium dimidiatum CBS 312.90 |
|
|
4353476 |
Neoscytalidium dimidiatum CBS 499.66 |
|
|
4353471 |
Neoscytalidium dimidiatum CBS 601.85 |
|
|
4353464 |
Neoscytalidium dimidiatum CBS 662.77 |
|
|
4353495 |
Neoscytalidium dimidiatum CMM 3566 |
|
|
4353467 |
Neoscytalidium dimidiatum CMM 3607 |
|
|
4353477 |
Neoscytalidium dimidiatum CMM 3616 |
|
|
4353468 |
Neoscytalidium dimidiatum CMM 3649 |
|
|
4353506 |
Neoscytalidium dimidiatum COUFAL0144 |
108428
|
9730531
|
4353482 |
Neoscytalidium dimidiatum COUFAL0145 |
108428
|
9730531
|
4353515 |
Neoscytalidium dimidiatum COUFAL0146 |
108428
|
9730531
|
4353502 |
Neoscytalidium dimidiatum DE1606 |
108428
|
9730531
|
4353490 |
Neoscytalidium dimidiatum PD103 |
108428
|
9730531
|
4353474 |
Neoscytalidium dimidiatum PD104 |
108428
|
9730531
|
4353462 |
Neoscytalidium dimidiatum PD105 |
108428
|
9730531
|
4353469 |
Neoscytalidium dimidiatum was novaehollandiae CBS 122070 |
|
|
4353466 |
Neoscytalidium dimidiatum was novaehollandiae CBS 122071 |
|
|
4353514 |
Neoscytalidium dimidiatum was novaehollandiae CBS 122072 |
|
|
4353457 |
Neoscytalidium dimidiatum was novaehollandiae CBS 122610 |
|
|
4353478 |
Neoscytalidium sp. 1 Arp2 D |
|
|
4353489 |
Neoscytalidium sp. 1 Kale4 C |
|
|