@ARTICLE{TreeBASE2Ref31676,
author = {Wu Zhang and Johannes (Ewald) Zacharias Groenewald and Lorenzo Lombard and Rene K. Schumacher and Alan John Lander Phillips and Pedro W. Crous},
title = {Evaluating species in Botryosphaeriales},
year = {2021},
keywords = {Multi-Locus Sequence Typing (MLST); canker and leaf spot pathogens; new taxa; systematics},
doi = {10.3767/persoonia.2021.46.03},
url = {http://doi.org/10.3767/persoonia.2021.46.03},
pmid = {},
journal = {Persoonia},
volume = {46},
number = {},
pages = {63--115},
abstract = {The Botryosphaeriales (Dothideomycetes) includes numerous endophytic, saprobic, and plant pathogenic species associated with a wide range of symptoms, most commonly on woody plants. In a recent phylogenetic treatment of 499 isolates in the culture collection (CBS) of the Westerdijk Institute, we evaluated the families and genera accommodated in this order of important fungi. The present study presents multigene phylogenetic analyses for an additional 230 isolates, using ITS, tef1, tub2, LSU and rpb2 loci, in combination with morphological data. Based on these data, 58 species are reduced to synonymy, and eight novel species are described. They include Diplodia afrocarpi (Afrocarpus, South Africa), Dothiorella diospyricola (Diospyros, South Africa), Lasiodiplodia acaciae (Acacia, Indonesia), Neofusicoccum podocarpi (Podocarpus, South Africa), N. rapaneae (Rapanea, South Africa), Phaeobotryon ulmi (Ulmus, Germany), Saccharata grevilleae (Grevillea, Australia) and S. hakeiphila (Hakea, Australia). The results have clarified the identity of numerous isolates that lacked Latin binomials or had been deposited under incorrect names in the CBS collection in the past. They also provide a solid foundation for more in-depth future studies on taxa in the order. Sequences of the tef1, tub2 and rpb2 genes proved to be the most reliable markers. At the species level, results showed that the most informative genes were inconsistent, but that a combination of four candidate barcodes (ITS, tef1, tub2 and rpb2) provided reliable resolution. Furthermore, given the large number of additional isolates included in this study, and newly generated multigene DNA datasets, several species could also be reduced to synonymy. The study illustrates the value of reassessing the identity of older collections in culture collections utilising modern taxonomic frameworks and methods.}
}
Taxa for matrix 57887 of Study 27596

Citation title:
"Evaluating species in Botryosphaeriales".

Study name:
"Evaluating species in Botryosphaeriales".

This study is part of submission 27596
(Status: Published).
Taxa
Return to matrix row view
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
4355367 |
Alanphillipsia aloeicola CBS 138896 |
|
|
4355365 |
Alanphillipsia aloeigena CBS 136408 |
|
1414674
|
4355364 |
Alanphillipsia aloes CBS 136410 |
|
|
4355366 |
Alanphillipsia aloetica CBS 136409 |
|
|
4353571 |
Alanphillipsia euphorbiae CBS 136411 |
|
|
4353520 |
Barriopsis iraniana CBS 124698 |
|
694449
|
4353531 |
Barriopsis iraniana CBS 124699 |
|
|
4353532 |
Barriopsis stevensiana CBS 174.26 |
|
|
4353529 |
Barriopsis tectonae CBS 137786 |
|
|
4352850 |
Lasiodiplodia theobromae CBS 164.96 |
|
|
4353565 |
Oblongocollomyces variabilis CBS 121774 |
|
1873953
|
4353563 |
Oblongocollomyces variabilis CBS 121775 |
|
|
4353523 |
Oblongocollomyces variabilis CBS 121776 |
|
|
4353554 |
Phaeobotryon aplospora CFCC 53773 |
|
|
4353535 |
Phaeobotryon aplospora CFCC 53774 |
|
|
4353526 |
Phaeobotryon aplospora CFCC 53775 |
|
|
4353568 |
Phaeobotryon aplospora CFCC 53776 |
|
|
4353536 |
Phaeobotryon cupressi CBS 124700 |
|
|
4353557 |
Phaeobotryon cupressi CBS 124701 |
|
|
4353570 |
Phaeobotryon mamane CBS 122980 |
|
|
4353553 |
Phaeobotryon mamane CPC 12442 |
|
|
4353551 |
Phaeobotryon negundinis CPC 33384 |
|
|
4353572 |
Phaeobotryon negundinis CPC 33388 |
|
|
4353561 |
Phaeobotryon negundinis CPC 34752 |
|
|
4353525 |
Phaeobotryon rhoinum CFCC 52449 |
|
|
4353521 |
Phaeobotryon rhoinum CFCC 52450 |
|
|
4353550 |
Phaeobotryon rhois CFCC 89662 |
|
|
4353527 |
Phaeobotryon rhois CFCC 89663 |
|
|
4353569 |
Phaeobotryon ulmi CBS 114123 |
|
|
4353528 |
Phaeobotryon ulmi CBS 123.30 |
|
|
4353560 |
Phaeobotryon ulmi CBS 138854 |
|
|
4353522 |
Sphaeropsis citrigena ICMP 16812 |
|
548668
|
4353544 |
Sphaeropsis citrigena ICMP 16818 |
|
|
4353555 |
Sphaeropsis eucalypticola CBS 133993 |
|
|
4353566 |
Sphaeropsis eucalypticola MFLUCC 11 0654 |
|
|
4353552 |
Sphaeropsis porosa CBS 110496 |
|
|
4353534 |
Sphaeropsis porosa CBS 110574 |
|
|
4353558 |
Sphaeropsis visci CBS 100163 |
|
|
4353524 |
Sphaeropsis visci CBS 122526 |
|
|
4353559 |
Sphaeropsis visci CBS 122527 |
|
371118
|
4353567 |
Sphaeropsis visci CBS 186.97 |
|
|
4353562 |
Sphaeropsis visci CPC 33386 |
|
|
4353556 |
Sphaeropsis visci CPC 35421 |
|
|
4353533 |
Sphaeropsis visci CPC 35525 |
|
|