@ARTICLE{TreeBASE2Ref17364,
author = {Scott R. Santos and Derek J. Taylor and Mary Alice Coffroth},
title = {Genetic comparisons of freshly isolated vs. cultured symbiotic dinoflagellates: Implications for extrapolation to the intact symbiosis.},
year = {2001},
keywords = {culture; internal transcribed spacer; microsatellites; small subunit rDNA genes; Symbiodinium; symbiosis; symbiotic dinoflagellates; zooxanthellae},
doi = {10.1046/j.1529-8817.2001.00194.x},
url = {},
pmid = {},
journal = {Journal of Phycology},
volume = {37},
number = {5},
pages = {900--912},
abstract = {Zooxanthellae, algal symbionts in divergent marine invertebrate hosts, are a genetically heterogeneous group. All species descriptions and most physiological and infection studies of zooxanthellae have been conducted using cultured material, yet few studies to date have attempted to quantify the representation of cultures isolated from cnidarians to the in hospite zooxanthella populations from which they were established. Restriction Fragment Length Polymorphisms (RFLPs) of 18S-rDNA, Internal Transcribed Spacer (ITS) sequence data and microsatellites analyses were conducted to assess the relatedness between cultured zooxanthellae and the in hospite population from which they were isolated. RFLP data demonstrated cultures may represent either the numerically dominant symbiont or ones present in lower number. ITS sequences from zooxanthella cultures are disconcordant with ITS sequence identified from the in hospite zooxanthellae and microsatellites present in in hospite zooxanthella populations were absent from the corresponding cultures. Lastly, reexamination of the literature reveals examples of zooxanthella cultures being nonrepresentative of in hospite populations. These data suggest that, in most cases, cultures are a subset of the original in hospite population. Factors such as failing to homogenize bulk cultures prior to transfer, growth medium employed and the picking of single motile cells are thought to contribute to many zooxanthella cultures being nonrepresentative.}
}
Taxa for Study 740

Citation title:
"Genetic comparisons of freshly isolated vs. cultured symbiotic dinoflagellates: Implications for extrapolation to the intact symbiosis.".

This study was previously identified under the legacy study ID S586
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
56617 |
Briareum asbestinum in hospite FL |
86543
|
2565198
|
56614 |
Eunicea sp in hospite 12 Ft Mound FL |
86557
|
253111
|
56624 |
Gorgonia sp in hospite 12 Ft Mound FL |
204383
|
253133
|
56626 |
Plexaura flexuosa culture Tennessee Reef FL |
204330
|
5451005
|
56627 |
Plexaura flexuosa in hospite Tennessee Reef FL |
204330
|
5451005
|
56618 |
Plexaura homomalla in hospite San Blas Panama |
47982
|
2565262
|
56608 |
Plexaura kuna culture #13 FL |
204331
|
5533771
|
56612 |
Plexaura kuna culture #702 San Blas Panama |
204331
|
5533771
|
56620 |
Plexaura kuna culture #704 San Blas Panama |
204331
|
5533771
|
56609 |
Plexaura kuna culture #706 San Blas Panama |
204331
|
5533771
|
56630 |
Plexaura kuna in hospite 12 Ft Mound FL |
204331
|
5533771
|
56629 |
Plexaura kuna in hospite Bache FL |
204331
|
5533771
|
56613 |
Plexaura kuna in hospite Bahamas |
204331
|
5533771
|
56610 |
Plexaura kuna in hospite Niantupo Panama |
204331
|
5533771
|
56621 |
Plexaura kuna in hospite North Bocas Panama colony 1 |
204331
|
5533771
|
56623 |
Plexaura kuna in hospite North Bocas Panama colony 3 |
204331
|
5533771
|
56611 |
Plexaura kuna in hospite San Blas Panama |
204331
|
5533771
|
56619 |
Plexaura kuna in hospite South Bocas Panama colony 2 |
204331
|
5533771
|
56607 |
Plexaura kuna in hospite South Bocas Panama colony 7 |
204331
|
5533771
|
56625 |
Plexaura kuna in hospite St Croix US Virgin Islands |
204331
|
5533771
|
56615 |
Pseudoterogorgia americana in hospite FL |
204378
|
2565411
|
56628 |
Pseudoterogorgia elisabethae culture Bahamas |
204377
|
2565416
|
56616 |
Pseudoterogorgia elisabethae in hospite Bahamas |
204377
|
2565416
|
56622 |
Symbiodinium kawagutii |
104179
|
3323441
|