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Matrices for Study 94

About Citation title: "A revision of Isidrogalvia (Liliaceae): Recognition for Ruiz and Pavon's Genus.".
About This study was previously identified under the legacy study ID S11x5x95c10c49c21 (Status: Published).

Matrices

ID Matrix Title Description Data type NTAX NCHAR Taxa
M12265 Ingroup cox1 x28 bc FFT INSI 20 cox1-a gene Ingroup dataset Nucleic Acid 28 576 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12268 Ingroup ITS2 Q INSI 200 ITS2 gene Ingroup Q INSI 200 alignment in MAFFT Complete dataset Nucleic Acid 27 928 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12279 Ingroup ITS2 Q INSI 200 allgaps ITS2 gene Ingroup Q INSI 200 alignment in MAFFT Allgaps dataset obtained in Gblocks Nucleic Acid 27 682 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12282 Ingroup D13 E INSI 200 allgaps LSU-a gene Ingroup E INSI 200 alignment in MAFFT Allgaps dataset obtained in Gblocks Nucleic Acid 27 967 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11715 rrnL FFT INSI 1 Allgaps rrnL outgroup dataset FFT INSI 1, alignement in MAFFT, exluding positions with AllGaps in g-blocks Nucleic Acid 34 734 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11716 rrnL FFT INSI 1 complete rrnL outgroup dataset FFT INSI 1 alignment in MAFFT Nucleic Acid 34 734 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11726 D13 Q INSI 200 LSU-a gene outgroup dataset Q INSI 200 alignment in MAFFT Nucleic Acid 33 1116 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12266 Ingroup MIT NUC all AllGaps x28 Ingroup dataset, concatenation of all genes, cob. cox1-a, cox1b, nd5, rrnL, LSU-a, LSU-b, ITS2 and HUWE1 Nucleic Acid 28 6988 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12263 Ingroup D13 E INSI 200 complete ULN LSU-a gene Ingroup E INSI 200 alignment in MAFFTcomplete dataset Nucleic Acid 27 970 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11714 ITS2 Q INSI 1 NoGaps ITS2 outgroup dataset Q INSI 1alignement in MAFFT, exluding positions with NoGaps in g-blocks Nucleic Acid 32 86 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12269 Ingroup nd5 FFT INSI 20 nd5 gene Ingroup dataset Nucleic Acid 27 903 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12272 Ingroup ITS2 Q INSI 200 nogaps ITS2 gene Ingroup Q INSI 200 alignment in MAFFT Nogaps dataset obtained in Gblocks Nucleic Acid 27 302 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11712 HUWE1 Q INSI 1 only coding HUWE1 gene outgroup dataset, Q INSI 1 alignment in MAFFT, only coding Nucleic Acid 25 562 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11706 cox1bc FFTNS 20 2P SC cox1-a gene, outgroup dataset Nucleic Acid 34 576 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11727 D13 Q INSI 200 NoGaps LSU-a gene outgroup dataset Q INSI 200 alignement in MAFFT, exluding positions with NoGaps in g-blocks Nucleic Acid 33 808 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12274 Ingroup XP Q INSI 200 complete HUWE1 gene ingroup dataset, Q INSI 200 alignment in MAFFT, complete dataset Nucleic Acid 23 658 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12270 Ingroup rrnL complete FFT INSI 1 rrnL gene Ingroup FFT INSI 1 alignment in MAFFT Complete dataset Nucleic Acid 28 733 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11709 NUC all AllGaps Outgroup dataset, Concatenation of nuclear genes LSU-a, LSU-b, ITS2 and HUWE1 Nucleic Acid 34 3371 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12264 Ingroup D13 E INSI 200 nogaps ULN LSU-a gene Ingroup E INSI 200 alignment in MAFFTNogaps dataset obtained in Gblocks Nucleic Acid 27 917 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12267 Ingroup cob x28 FFT INSI 20 cob gene Ingroup dataset Nucleic Acid 28 666 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11720 D67 Q INSI 200 LSU-b gene outgroup dataset Q INSI 200 alignment in MAFFT Nucleic Acid 31 1133 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11718 ITS2 Q INSI 1 ITS2 outgroup datasetQ INSI 1 alignment in MAFFT Nucleic Acid 32 1264 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11711 MIT NUC all AllGaps Bygene Outgroup dataset, Concatenation of all genes, cob. cox1-a, cox1b, nd5, rrnL, LSU-a, LSU-b, ITS2 and HUWE1 Nucleic Acid 34 7018 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11717 rrnL FFT INSI 1 NoGaps rrnL outgroup dataset FFT INSI 1, alignement in MAFFT, exluding positions with NoGaps in g-blocks Nucleic Acid 34 705 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11723 D67 Q INSI 200 AllGaps LSU-b gene outgroup dataset Q INSI 200 alignement in MAFFT, exluding positions with AllGaps in g-blocks Nucleic Acid 31 961 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12273 Ingroup MIT all x28 Ingroup dataset, Concatenation of mitochondriall genes cob. cox1-a, cox1b, nd5 and rrnL Nucleic Acid 28 3646 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11722 nd5 FFTNS 20 2P nd5 gene outgroup dataset Nucleic Acid 32 903 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12277 Ingroup cox1 pj FFT INSI 20 2P SC cox1-b gene Ingroup dataset Nucleic Acid 28 768 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11707 cox1PatJerry FFTNS 20 cox1-b gene, outgroup dataset Nucleic Acid 34 768 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12278 Ingroup rrnL FFT INSI 1 nogaps rrnL gene Ingroup FFT INSI 1 alignment in MAFFT Nogaps dataset as obtained in Gblocks Nucleic Acid 28 718 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11713 HUWE1 Q INSI 1 complete HUWE1 gene outgroup dataset, Q INSI 1 alignment in MAFFT,complete Nucleic Acid 25 681 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11721 D67 Q INSI 200 NoGaps LSU-b gene outgroup dataset Q INSI 200, alignement in MAFFT, exluding positions with NoGaps in g-blocks Nucleic Acid 31 596 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12271 Ingroup D67 Q INSI 200 LSU-b gene Ingroup Q INSI 200 alignment in MAFFT Complete dataset Nucleic Acid 27 1109 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12283 Ingroup D67 Q INSI 200 nogaps LSU-b gene Ingroup Q INSI 200 alignment in MAFFT Nogaps dataset obtained in Gblocks Nucleic Acid 27 602 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12280 Ingroup NUC all AllGaps Ingroup dataset, Concatenation of nuclear genes LSU-a, LSU-b, ITS2 and HUWE1 Nucleic Acid 28 3342 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11728 D13 Q INSI 200 AllGaps LSU-a gene outgroup dataset Q INSI 200 alignement in MAFFT, exluding positions with AllGaps in g-blocks Nucleic Acid 33 1021 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11719 ITS2 Q INSI 1 AllGaps ITS2 outgroup datasetQ INSI 1, alignement in MAFFT, exluding positions with AllGaps in g-blocks Nucleic Acid 32 708 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11703 Cytb FFTNS 20 cob gene outgroup dataset Nucleic Acid 34 666 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12276 Ingroup D67 Q INSI 200 allgaps LSU-b gene Ingroup Q INSI 200 alignment in MAFFT Allgaps dataset obtained in Gblocks Nucleic Acid 27 1035 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M11708 MIT all NoGaps bygene Outgroup dataset, Concatenation of mitochondriall genes cob. cox1-a, cox1b, nd5 and rrnL Nucleic Acid 34 3618 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12281 Ingroup XP Q INSI 200 onlyCoding HUWE1 gene ingroup dataset, Q INSI 200 alignment in MAFFT, only coding Nucleic Acid 23 543 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List
M12275 Ingroup rrnL allgaps FFT INSI 1 rrnL gene Ingroup FFT INSI 1 alignment in MAFFT Allgaps dataset as obtained in Gblocks Nucleic Acid 28 733 View Taxa Download NeXML File Download Reconstructed NEXUS File Download Original File Matrix Row List