@ARTICLE{TreeBASE2Ref19493,
author = {Ulf Jondelius and Andreas Wallberg and Matthew Hooge and Olga I Raikova},
title = {How the Worm Got its Pharynx: Phylogeny, Classification and Bayesian assessment of Character Evolution in Acoela},
year = {2011},
keywords = {Acoela, phylogeny, classification, character evolution, Bayesian inference},
doi = {10.1093/sysbio/syr073},
url = {http://},
pmid = {},
journal = {Systematic Biology},
volume = {60},
number = {6},
pages = {845--871},
abstract = {Acoela are marine microscopic worms currently thought to be the sister taxon of all other bilaterians. Acoels have long been used as models in evolutionary scenarios, and generalized conclusions about acoel and bilaterian ancestral features are frequently drawn from studies of single acoel species. There is no extensive phylogenetic study of Acoela and the taxonomy of the 380 species is chaotic. Here we use two nuclear ribosomal genes and one mitochondrial gene in combination with 37 morphological characters in an analysis of 126 acoel terminals (about one third of the described species) to estimate the phylogeny and character evolution of Acoela. We present an estimate of posterior probabilities for ancestral character states at 31 control nodes in the phylogeny. The overall reconstruction signal based on the shape of the posterior distribution of character states was computed for all morphological characters and control nodes to assess how well these were reconstructed. The body-wall musculature appears more clearly reconstructed than the reproductive organs. Posterior similarity to the root was calculated by averaging the divergence between the posterior distributions at the nodes and the root over all morphological characters. Diopisthoporidae is the sister group to all other acoels and has the highest posterior similarity to the root. Convolutidae, including several ?model? acoels, is most divergent. Finally, we present a phylogenetic classification of Acoela down to the family level where six previous family level taxa are synonymized.}
}
Taxa for Study 11235
Citation title:
"How the Worm Got its Pharynx: Phylogeny, Classification and Bayesian assessment of Character Evolution in Acoela".
Study name:
"How the Worm Got its Pharynx: Phylogeny, Classification and Bayesian assessment of Character Evolution in Acoela".
This study is part of submission 11225
(Status: Published).
Taxa
ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
470567 |
Actinoposthia beklemischevi |
84061
|
5015909
|
470605 |
Actinoposthia haplovata |
|
5015915
|
470618 |
Amphiscolops bermudensis |
|
5016014
|
470541 |
Amphiscolops sp |
|
|
470600 |
Amphiscolops sp Hendelberg |
|
|
470610 |
Anaperus biaculeatus |
84067
|
5015871
|
470607 |
Anaperus gardineri |
188020
|
5015873
|
470554 |
Anaperus rubellus |
|
5015875
|
470611 |
Anaperus singularis |
|
5473604
|
470534 |
Anaperus tvaerminnensis |
90924
|
5015879
|
470574 |
Antalis entalis GB |
211836
|
5531167
|
470659 |
Aphanostoma bruscai |
188024
|
5016038
|
470561 |
Aphanostoma collinae |
|
|
470558 |
Aphanostoma sp |
|
|
470543 |
Aphanostoma virescens |
|
5016047
|
470538 |
Apionsoma misakianum GB |
210783
|
2634899
|
470632 |
Archaphanostoma macrospiriferum |
|
5016053
|
470608 |
Ascoparia sp |
|
|
470640 |
Asterias forbesi GB |
7603
|
593483
|
470551 |
Atriofronta polyvacuola |
|
5015921
|
470575 |
Aurelia sp GB |
|
|
470614 |
Avagina marci |
|
5016059
|
470547 |
Avagina n.sp. |
|
|
470669 |
Branchiostoma floridae GB |
7739
|
595973
|
470631 |
Childia brachyposthium |
243777
|
5436776
|
470563 |
Childia crassum |
296776
|
5436778
|
470570 |
Childia cycloposthium |
172106
|
5436780
|
470628 |
Childia groenlandica |
84071
|
492584
|
470620 |
Childia macroposthium |
243776
|
5436790
|
470661 |
Childia nsp 1 |
|
|
470654 |
Childia nsp 2 |
|
|
470576 |
Childia sp |
|
|
470657 |
Childia submaculatum |
243778
|
5436792
|
470617 |
Childia trianguliferum |
662540
|
5436794
|
470636 |
Childia vivipara |
|
|
470612 |
Ciona intestinalis GB |
7719
|
2764548
|
470664 |
Convoluta cf bohmigi |
|
5016077
|
470595 |
Convoluta convoluta |
84062
|
5016085
|
470639 |
Convolutriloba hastifera |
536235
|
5016709
|
470594 |
Convolutriloba longifissura |
536236
|
5016711
|
470623 |
Convolutriloba macropyga |
536237
|
|
470539 |
Convolutriloba retrogemma |
536238
|
5016713
|
470627 |
Daku woorimensis |
|
5539179
|
470571 |
Diopisthoporus longitubus |
|
492573
|
470537 |
Diopisthoporus nsp |
|
|
470667 |
Diopisthoporus psammophilus |
|
5016259
|
470606 |
Endocincta nsp |
|
|
470662 |
Endocincta punctata |
|
5016735
|
470673 |
Eumecynostomum altitudi |
243782
|
5016579
|
470544 |
Faerlea glomerata |
|
5016154
|
470581 |
Hallangia proporoides |
|
5016265
|
470658 |
Haplocelis dichona |
|
5016649
|
470626 |
Haplogonaria schillingi |
|
|
470643 |
Haplogonaria syltensis |
90920
|
5016522
|
470588 |
Haplogonaria viridis |
|
5016524
|
470559 |
Haploposthia lactomaculata |
|
5468132
|
470615 |
Haploposthia rubra |
|
5016496
|
470540 |
Haploposthia sp |
|
|
470633 |
Haploposthia vandula |
|
5016494
|
470647 |
Heterochaerus blumi |
|
|
470637 |
Hofstenia miamia |
442651
|
2680128
|
470552 |
Hofsteniola pardii |
|
5016569
|
470577 |
Isodiametra bajaensis |
|
|
470560 |
Isodiametra cuernos |
|
|
470624 |
Isodiametra divae |
|
|
470625 |
Isodiametra hortulus |
|
|
470674 |
Isodiametra nicki |
|
|
470619 |
Isodiametra norvegica |
|
|
470573 |
Isodiametra pulchra |
504439
|
|
470572 |
Isodiametra vexillaria |
|
|
470587 |
Kuma albiventer |
|
5016526
|
470644 |
Kuma viridis |
|
5016534
|
470645 |
Meara stichopi |
84115
|
5016765
|
470589 |
Mecynostomum auritum |
296779
|
5016605
|
470666 |
Mecynostomum sp |
|
|
470582 |
Montastraea franksi GB |
48499
|
2566378
|
470550 |
Myopea callaeum |
|
|
470630 |
Myopea sp |
|
|
470672 |
Nemertoderma sp |
|
|
470660 |
Neochildia fusca |
66402
|
5593417
|
470591 |
Nephrops norvegicus GB |
6829
|
2706547
|
470542 |
Notocelis gullmarensis |
|
5016653
|
470593 |
Oerstedia dorsalis GB |
231370
|
496021
|
470596 |
Oligofilomorpha interstitiophilum |
442653
|
7200680
|
470653 |
Otocelis erinae |
|
|
470579 |
Otocelis sandara |
188044
|
5016665
|
470564 |
Paedomecynostomum bruneum |
90912
|
5016615
|
470649 |
Paramecynostomum diversicolor |
243784
|
5016619
|
470641 |
Paramecynostomum sp |
|
|
470556 |
Paratomella rubra |
90914
|
5016684
|
470548 |
Paratomella unichaeta |
188050
|
5016686
|
470668 |
Pelophila lutheri |
188023
|
5015961
|
470601 |
Philactinoposthia coneyi |
|
|
470675 |
Philactinoposthia n.sp. |
|
|
470585 |
Philactinoposthia nsp 2 |
|
|
470621 |
Philactinoposthia saliens |
84155
|
5015975
|
470638 |
Philactinoposthia sp |
|
|
470535 |
Philactinoposthia sp 2 |
|
|
470652 |
Philactinoposthia sp 3 |
|
|
470651 |
Philactinoposthia sp 4 |
|
|
470629 |
Philocelis brueggemanni |
188046
|
5016669
|
470586 |
Philocelis karlingi |
296777
|
5016673
|
470569 |
Philocelis robrochai |
|
|
470609 |
Philomecynostomum lapillum |
66286
|
5016621
|
470650 |
Philomecynostomum sp |
|
|
470598 |
Polycanthus sp |
|
|
470562 |
Polycanthus sp 2 |
|
|
470634 |
Polycanthus torosus |
|
5539183
|
470592 |
Postmecynostomum pictum |
90926
|
5016625
|
470646 |
Praeconvoluta bocasensis |
|
|
470671 |
Praeconvoluta castinea |
|
5016196
|
470533 |
Praeconvoluta tigrina |
188030
|
5016206
|
470597 |
Praeconvoluta tornuva |
188031
|
5016208
|
470584 |
Praesagittifera naikaiensis |
|
5016717
|
470566 |
Priapulus caudatus GB |
37621
|
4780013
|
470663 |
Proaphanostoma tenuissima |
|
7200616
|
470549 |
Proporus bermudensis |
|
5016688
|
470545 |
Proporus brochii |
|
5016690
|
470578 |
Proporus carolinensis |
442656
|
5473610
|
470648 |
Proporus sp |
|
|
470536 |
Proporus sp 2 |
|
|
470590 |
Pseudactinoposthia sanguineum |
|
|
470655 |
Pseudaphanostoma herringi |
|
|
470546 |
Pseudaphanostoma smithrii |
188033
|
5016244
|
470557 |
Pseudmecynostomum bruneophilum |
|
7200659
|
470642 |
Pseudmecynostomum phoca |
188041
|
5016635
|
470670 |
Pseudohaplogonaria rodmani |
|
|
470613 |
Pseudohaplogonaria sp |
|
|
470635 |
Ramazzottius oberhaeuseri GB |
459434
|
6328369
|
470604 |
Raphidophallus actuosus |
|
492580
|
470603 |
Rosacea flaccida GB |
316189
|
2572136
|
470565 |
Simplicomorpha gigantorhabditis |
90918
|
5016558
|
470622 |
Solenofilomorpha crezeei |
|
|
470553 |
Solenofilomorpha n.sp. 2 |
|
|
470580 |
Solenofilomorpha nsp |
|
|
470665 |
Stromatricha hochbergi |
|
5539178
|
470602 |
Symsagittifera corsicae |
170512
|
5600354
|
470568 |
Symsagittifera psammophila |
90916
|
5016729
|
470599 |
Symsagittifera roscoffensis |
84072
|
5466265
|
470555 |
Terebellides stroemi GB |
36115
|
2552018
|
470616 |
Terebratulina retusa GB |
7580
|
2765677
|
470583 |
Waminoa brickneri |
|
|
470656 |
Waminoa sp |
|
|